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LOC9638347 4-alpha-glucanotransferase DPE2 [ Selaginella moellendorffii ]

Gene ID: 9638347, updated on 22-Oct-2023

Summary

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Gene symbol
LOC9638347
Gene description
4-alpha-glucanotransferase DPE2
Locus tag
SELMODRAFT_427302
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314350.1 (717119..721221, complement)

NW_003314350.1Genomic Context describing neighboring genes Neighboring gene ubiquitin carboxyl-terminal hydrolase 2 Neighboring gene uncharacterized LOC112341771 Neighboring gene putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial Neighboring gene pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like Neighboring gene transfer RNA histidin (anticodon GUG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314350 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-glucanotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables starch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-alpha-glucanotransferase DPE2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314350.1 Reference v1.0

    Range
    717119..721221 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024662388.1 → XP_024518156.1  4-alpha-glucanotransferase DPE2 isoform X2

    UniProtKB/TrEMBL
    D8SZ64
    Conserved Domains (1) summary
    PLN02950
    Location:21 → 935
    PLN02950; 4-alpha-glucanotransferase

  2. XM_024662387.1 → XP_024518155.1  4-alpha-glucanotransferase DPE2 isoform X1

    UniProtKB/TrEMBL
    D8SZ64
    Conserved Domains (1) summary
    PLN02950
    Location:21 → 951
    PLN02950; 4-alpha-glucanotransferase
Nucleotide Protein
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