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chlD magnesium chelatase subunit D chloroplast precursor [ Volvox carteri f. nagariensis ]

Gene ID: 9618950, updated on 10-Jan-2024

Summary

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Gene symbol
chlD
Gene description
magnesium chelatase subunit D chloroplast precursor
Locus tag
VOLCADRAFT_107092
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Volvox carteri f. nagariensis (strain: Eve, forma: nagariensis)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Chlamydomonadales; Volvocaceae; Volvox
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Genomic context

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See chlD in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
13

NW_003307601.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003307601.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic analysis of organismal complexity in the multicellular green alga Volvox carteri. Prochnik SE, et al. Science, 2010 Jul 9. PMID 20616280, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium chelatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chlorophyll biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
magnesium chelatase subunit D chloroplast precursor
XP_002956151.1
  • Magnesium-chelatase subunit ChlD, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D); forms an ATP dependent complex with the ChlI subunit before acting on the protoporphyrin which is bound to the ChlH protein to insert magnesium

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003307601.1 Reference assembly

    Range
    27923..35717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002956105.1 → XP_002956151.1  magnesium chelatase subunit D chloroplast precursor [Volvox carteri f. nagariensis]

    See identical proteins and their annotated locations for XP_002956151.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8UBW5
    Conserved Domains (3) summary
    cd01451
    Location:498 → 682
    vWA_Magnesium_chelatase; Magnesium chelatase: Mg-chelatase catalyses the insertion of Mg into protoporphyrin IX (Proto). In chlorophyll biosynthesis, insertion of Mg2+ into protoporphyrin IX is catalysed by magnesium chelatase in an ATP-dependent reaction. Magnesium chelatase is ...
    TIGR02031
    Location:32 → 682
    BchD-ChlD; magnesium chelatase ATPase subunit D
    cl21455
    Location:25 → 204
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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