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SCHCODRAFT_02730130 uncharacterized protein [ Schizophyllum commune H4-8 ]

Gene ID: 9587862, updated on 23-Nov-2023

Summary

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Gene symbol
SCHCODRAFT_02730130
Gene description
uncharacterized protein
Locus tag
SCHCODRAFT_02730130
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_12700
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Genomic context

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Location:
chromosome: Unknown
Exon count:
23

NW_026089542.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Nop14-like protein Neighboring gene uncharacterized protein Neighboring gene yeats-domain-containing protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089542.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089542.1 Reference assembly

    Range
    1422802..1430184
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003036545.2 → XP_003036591.1  uncharacterized protein SCHCODRAFT_02730130 [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003036591.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8PQG1
    Conserved Domains (4) summary
    cd00892
    Location:1614 → 1875
    PIKKc_ATR; Catalytic domain of Ataxia telangiectasia and Rad3-related proteins
    pfam02259
    Location:1086 → 1413
    FAT; FAT domain
    pfam02260
    Location:1938 → 1961
    FATC; FATC domain
    pfam08064
    Location:431 → 532
    UME; UME (NUC010) domain
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases