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yfaY IPR008135 CinA family protein YfaY [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945478, updated on 4-Apr-2024

Summary

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Gene symbol
yfaY
Gene description
IPR008135 CinA family protein YfaY
Primary source
ASAP:ABE-0007441
Locus tag
b2249
See related
ECOCYC:G7162
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK2242
Summary
YfaY is in the gephyrin/MoeA superfamily. [More information is available at EcoGene: EG14087].
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Genomic context

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Sequence:
NC_000913.3 (2362431..2363633, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene L-rhamnonate dehydratase Neighboring gene putative DNA-binding transcriptional regulator YfaX Neighboring gene putative porin YfaZ Neighboring gene pyrimidine deoxynucleotide diphosphatase NudI

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
  2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
  4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General protein information

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Preferred Names
IPR008135 CinA family protein YfaY

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    2362431..2363633 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416752.1 IPR008135 CinA family protein YfaY [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416752.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A8S7EAJ6
    Conserved Domains (1) summary
    PRK03673
    Location:1 → 396
    PRK03673; nicotinamide mononucleotide deamidase-related protein YfaY
Nucleotide Protein
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