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ybgP putative fimbrial chaperone YbgP [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 945110, updated on 4-Apr-2024

Summary

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Gene symbol
ybgP
Gene description
putative fimbrial chaperone YbgP
Primary source
ASAP:ABE-0002443
Locus tag
b0717
See related
ECOCYC:G6386
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0706
Summary
YbgP is a hypothetical protein. [More information is available at EcoCyc: G6386].
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Genomic context

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Sequence:
NC_000913.3 (748979..749707, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene 5-oxoprolinase component C Neighboring gene 5-oxoprolinase component A Neighboring gene endonuclease VIII Neighboring gene putative regulator Neighboring gene putative fimbrial protein YbgO Neighboring gene putative fimbrial usher protein YbgQ Neighboring gene putative fimbrial protein YbgD

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Conserved immunoglobulin-like features in a family of periplasmic pilus chaperones in bacteria. Holmgren A, et al. EMBO J, 1992 Apr. PMID 1348692, Free PMC Article
  2. Escherichia coli K-12 possesses multiple cryptic but functional chaperone-usher fimbriae with distinct surface specificities. Korea CG, et al. Environ Microbiol, 2010 Jul. PMID 20345943
  3. The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes. Zhai Y, et al. Protein Sci, 2002 Sep. PMID 12192075, Free PMC Article
  4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Gene Ontology Provided by EcoCyc

Process Evidence Code Pubs
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
  
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein folding IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in outer membrane-bounded periplasmic space IEA
Inferred from Electronic Annotation
more info
  
located_in periplasmic space IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative fimbrial chaperone YbgP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    748979..749707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_415245.1 putative fimbrial chaperone YbgP [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_415245.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A2X1JCM7
    Conserved Domains (1) summary
    COG3121
    Location:1 → 230
    FimC; P pilus assembly protein, chaperone PapD [Extracellular structures]
Nucleotide Protein
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