These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001082618.1 → NP_001076087.1 myeloid cell surface antigen CD33 isoform 2 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon in the 5' coding region, compared to variant 1, resulting in a shorter protein (isoform 2, also known as CD33m), compared to isoform 1.
- Source sequence(s)
-
AW007749, AY162464, BP303860
- Consensus CDS
-
CCDS46157.1
- UniProtKB/TrEMBL
-
C9JEN7
- Related
- ENSP00000410126, ENST00000421133
- Conserved Domains (1) summary
-
- cl11960
Location:18 – 91
Blast Score: 91
- Ig; Immunoglobulin domain
-
NM_001177608.1 → NP_001171079.1 myeloid cell surface antigen CD33 isoform 3 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 3' UTR and coding sequence compared to variant 1. The resulting isoform (3) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AK304810, AK309558, BP295158
- Consensus CDS
-
CCDS54299.1
- UniProtKB/TrEMBL
-
B4E3P8
- UniProtKB/TrEMBL
-
F8WAL2
- Related
- ENSP00000375673, ENST00000391796
- Conserved Domains (2) summary
-
- pfam07686
Location:24 – 136
Blast Score: 137
- V-set; Immunoglobulin V-set domain
- cl11960
Location:23 – 139
Blast Score: 354
- Ig; Immunoglobulin domain
-
NM_001772.3 → NP_001763.3 myeloid cell surface antigen CD33 isoform 1 precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1), also known as CD33M.
- Source sequence(s)
-
AW007749, BC028152, BP303860
- Consensus CDS
-
CCDS33084.1
- UniProtKB/Swiss-Prot
-
P20138
- UniProtKB/TrEMBL
-
Q546G0
- Related
- ENSP00000262262, ENST00000262262
- Conserved Domains (2) summary
-
- pfam07686
Location:24 – 136
Blast Score: 137
- V-set; Immunoglobulin V-set domain
- cl11960
Location:23 – 139
Blast Score: 358
- Ig; Immunoglobulin domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000019.9 Reference GRCh37.p5 Primary Assembly
- Range
- 51728335..51743274
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000151.1 Alternate HuRef
- Range
- 48061383..48076328
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)