These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001242559.1 → NP_001229488.1 mitogen-activated protein kinase kinase kinase kinase 4 isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses two alternate in-frame splice sites and lacks an alternate in-frame exon in the central coding region, compared to variant 2. The encoded isoform (4) is shorter than isoform 2. The 5' UTR of this variant is incomplete due to a lack of 5'-complete transcripts representing this variant, and the presence of splicing ambiguity in the 5' UTR.
- Source sequence(s)
-
AC005035, AY212247, BU625485, DB086475
- Consensus CDS
-
CCDS56130.1
- UniProtKB/Swiss-Prot
-
O95819
- Related
- ENSP00000314363, OTTHUMP00000207903, ENST00000347699, OTTHUMT00000339839
- Conserved Domains (3) summary
-
- cd06636
Location:8 – 289
Blast Score: 1359
- STKc_MAP4K4_6; Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6
- smart00220
Location:25 – 289
Blast Score: 632
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cl02434
Location:921 – 1219
Blast Score: 822
- CNH; CNH domain
-
NM_001242560.1 → NP_001229489.1 mitogen-activated protein kinase kinase kinase kinase 4 isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks two alternate in-frame exons but includes two different alternate in-frame exons in the central coding region, compared to variant 2. The encoded isoform (5) is shorter than isoform 2.
- Source sequence(s)
-
AC005035, AC007005, AK296396, BU625485, DR002278
- UniProtKB/TrEMBL
-
B7Z3V5
- Related
- ENSP00000343658, ENST00000350878
- Conserved Domains (3) summary
-
- smart00220
Location:25 – 289
Blast Score: 633
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cl02434
Location:917 – 1215
Blast Score: 820
- CNH; CNH domain
- cl09925
Location:8 – 289
Blast Score: 1358
- PKc_like; Protein Kinases, catalytic domain
-
NM_004834.4 → NP_004825.3 mitogen-activated protein kinase kinase kinase kinase 4 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) lacks two alternate in-frame exons but includes a different in-frame exon in the central coding region, and uses an alternate in-frame splice site in both the central and 3' coding regions, compared to variant 2. The encoded isoform (1) is shorter than isoform 2.
- Source sequence(s)
-
AC005035, AC007005, AF096300, BU625485, DR002278
- UniProtKB/Swiss-Prot
-
O95819
- Related
- ENSP00000389752, OTTHUMP00000207971, ENST00000413150, OTTHUMT00000339992
- Conserved Domains (3) summary
-
- cd06636
Location:8 – 289
Blast Score: 1360
- STKc_MAP4K4_6; Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6
- smart00220
Location:25 – 289
Blast Score: 628
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cl02434
Location:839 – 1145
Blast Score: 810
- CNH; CNH domain
-
NM_145686.3 → NP_663719.2 mitogen-activated protein kinase kinase kinase kinase 4 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) represents the longest transcript and encodes the longest isoform (2).
- Source sequence(s)
-
AC005035, AC007005, BC064691, BU625485, DR002278
- Related
- ENSP00000392830, OTTHUMP00000207902, ENST00000425019, OTTHUMT00000339838
- Conserved Domains (3) summary
-
- cd06636
Location:8 – 289
Blast Score: 1359
- STKc_MAP4K4_6; Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6
- smart00220
Location:25 – 289
Blast Score: 632
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cl02434
Location:955 – 1253
Blast Score: 822
- CNH; CNH domain
-
NM_145687.3 → NP_663720.1 mitogen-activated protein kinase kinase kinase kinase 4 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate in-frame exon but includes a different in-frame exon in the central coding region, compared to variant 2. The encoded isoform (3) is shorter than isoform 2. The 5' UTR of this variant is incomplete due to a lack of 5'-complete transcripts representing this variant, and the presence of splicing ambiguity in the 5' UTR.
- Source sequence(s)
-
AB014587, AC005035, BU625485, DB086475
- UniProtKB/Swiss-Prot
-
O95819
- Conserved Domains (3) summary
-
- cd06636
Location:8 – 289
Blast Score: 1360
- STKc_MAP4K4_6; Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6
- smart00220
Location:25 – 289
Blast Score: 632
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cl02434
Location:894 – 1192
Blast Score: 822
- CNH; CNH domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000002.11 Reference GRCh37.p5 Primary Assembly
- Range
- 102314165..102511152
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000134.1 Alternate HuRef
- Range
- 96077883..96275019
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)