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    pheA2 bifunctional chorismate mutase/ prephenate dehydratase [ Clostridium ljungdahlii DSM 13528 ]

    Gene ID: 9446529, updated on 18-May-2013
    Gene symbol
    pheA2
    Gene description
    bifunctional chorismate mutase/ prephenate dehydratase
    Locus tag
    CLJU_c29130
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Clostridium ljungdahlii DSM 13528 (strain: ATCC 49587, culture-collection: ATCC:49587, old-name: Clostridium ljungdahlii ATCC 49587)
    Lineage
    Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
    Location :
    isolation source: chicken yard waste
    Sequence :
    NC_014328.1 (3215578..3216714, complement)

    NC_014328.1Genomic Context describing neighboring genes Neighboring gene shikimate kinase Neighboring gene shikimate dehydrogenase Neighboring gene chorismate synthase Neighboring gene 3-phosphoshikimate 1-carboxyvinyltransferase Neighboring gene 3-dehydroquinate synthase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Clostridium ljungdahlii represents a microbial production platform based on syngas. Köpke M, et al. Proc Natl Acad Sci U S A, 2010 Jul 20. PMID 20616070.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    bifunctional chorismate mutase/ prephenate dehydratase
    YP_003781063.1

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014328.1

      Range
      3215578..3216714, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003781063.1 bifunctional chorismate mutase/ prephenate dehydratase [Clostridium ljungdahlii DSM 13528]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D8GP83
      Conserved Domains (4) summary
      COG0077
      Location:108 – 373
      Blast Score: 664
      PheA; Prephenate dehydratase [Amino acid transport and metabolism]
      pfam00800
      Location:109 – 286
      Blast Score: 565
      PDT; Prephenate dehydratase
      cd04905
      Location:295 – 374
      Blast Score: 284
      ACT_CM-PDT; C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme
      smart00830
      Location:8 – 85
      Blast Score: 173
      CM_2; Chorismate mutase type II
    Nucleotide Protein
    Heading Accession and Version
    genomic CP001666.1 ADK15961.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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