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sspC small acid-soluble spore protein (alpha/beta-type SASP); SPbeta phage protein [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939473, updated on 12-Feb-2021

Summary

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Gene symbol
sspC
Gene description
small acid-soluble spore protein (alpha/beta-type SASP); SPbeta phage protein
Locus tag
BSU_19950
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU19950
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Genomic context

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Sequence:
NC_000964.3 (2156239..2156457)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein; phage SPbeta Neighboring gene putative metallo-dependent hydrolase; phage SPbeta Neighboring gene conserved hypothetical protein; phage SPbeta Neighboring gene conserved hypothetical protein; phage SPbeta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Roles of the major, small, acid-soluble spore proteins and spore-specific and universal DNA repair mechanisms in resistance of Bacillus subtilis spores to ionizing radiation from X rays and high-energy charged-particle bombardment. Moeller R, et al. J Bacteriol, 2008 Feb. PMID 18055591, Free PMC Article
  2. Crystallization and preliminary X-ray analysis of the complex between a Bacillus subtilis alpha/beta-type small acid-soluble spore protein and DNA. Bumbaca D, et al. Acta Crystallogr Sect F Struct Biol Cryst Commun, 2007 Jun 1. PMID 17554173, Free PMC Article
  3. Role of the Nfo and ExoA apurinic/apyrimidinic endonucleases in repair of DNA damage during outgrowth of Bacillus subtilis spores. Ibarra JR, et al. J Bacteriol, 2008 Mar. PMID 18203828, Free PMC Article
  4. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  5. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Results suggest that alpha/beta-type SASP, Nfo/ExoA, RecA, and NER system all contribute to the repair of and/or protection against oxidative damage of DNA in germinating and outgrowing spores.
    Title: Role of the Nfo and ExoA apurinic/apyrimidinic endonucleases in repair of DNA damage during outgrowth of Bacillus subtilis spores.
  2. The loss of alpha/beta-type SASP leads to a significant radiosensitivity to ionizing radiation, suggesting the essential function of these spore proteins as protectants of spore DNA against ionizing radiation.
    Title: Roles of the major, small, acid-soluble spore proteins and spore-specific and universal DNA repair mechanisms in resistance of Bacillus subtilis spores to ionizing radiation from X rays and high-energy charged-particle bombardment.
  3. An engineered variant of an alpha/beta-type small acid-soluble spore protein (SASP) from Bacillus subtilis has been crystallized in a complex with a ten-base-pair double-stranded DNA.
    Title: Crystallization and preliminary X-ray analysis of the complex between a Bacillus subtilis alpha/beta-type small acid-soluble spore protein and DNA.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
small acid-soluble spore protein (alpha/beta-type SASP); SPbeta phage protein
NP_389876.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10376821, 12234173, 14526021, 15150240; Product type s: structure

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389876.1 small acid-soluble spore protein (alpha/beta-type SASP); SPbeta phage protein [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389876.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    pfam00269
    Location:15 → 67
    SASP; Small, acid-soluble spore proteins, alpha/beta type
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P02958.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases