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spoVAF stage V sporulation protein AF [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938936, updated on 4-Feb-2024

Summary

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Gene symbol
spoVAF
Gene description
stage V sporulation protein AF
Locus tag
BSU_23390
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU23390
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Genomic context

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Sequence:
NC_000964.3 (2438372..2439853, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene meso-2,6-diaminopimelate decarboxylase Neighboring gene stage V sporulation germinant protein Neighboring gene spore germinant protein Neighboring gene stage V sporulation protein AD (uptake of pyridine-2,6-dicarboxylic acid)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
stage V sporulation protein AF
NP_390220.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16077113, 17573930, 24682327, 26604257; Product type cp: cell process

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2438372..2439853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390220.2 stage V sporulation protein AF [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390220.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AA34YQW1
    Conserved Domains (1) summary
    pfam03323
    Location:20 → 480
    GerA; Bacillus/Clostridium GerA spore germination protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P31845.4

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases