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yqfO putative GTP cyclohydrolase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937901, updated on 4-Feb-2024

Summary

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Gene symbol
yqfO
Gene description
putative GTP cyclohydrolase
Locus tag
BSU_25170
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU25170
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Genomic context

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Sequence:
NC_000964.3 (2597502..2598623, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase Neighboring gene tRNA (adenine(22)-N(1))-methyltransferase Neighboring gene cytochrome c550 Neighboring gene RNA polymerase major sigma-43 factor (sigma-A)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. RNA-seq analysis identified glucose-responsive genes and YqfO as a global regulator in Bacillus subtilis. Kanesaki Y, et al. BMC Res Notes, 2021 Dec 14. PMID 34906218, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. RNA-seq analysis identified glucose-responsive genes and YqfO as a global regulator in Bacillus subtilis.
    Title: RNA-seq analysis identified glucose-responsive genes and YqfO as a global regulator in Bacillus subtilis.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
putative GTP cyclohydrolase
NP_390396.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 17187687, 17586767; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2597502..2598623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390396.1 putative GTP cyclohydrolase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390396.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AA34VKL6
    Conserved Domains (2) summary
    TIGR00486
    Location:5 → 369
    YbgI_SA1388; dinuclear metal center protein, YbgI/SA1388 family
    COG3323
    Location:133 → 240
    YqfO; Uncharacterized protein YbgI, a toroidal structure with a dinuclear metal site [Function unknown]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54472.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases