Display Settings:

Format

Send to:

Choose Destination

GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa [ Homo sapiens (human) ]

Gene ID: 9329, updated on 27-Sep-2014
Official Symbol
GTF3C4provided by HGNC
Official Full Name
general transcription factor IIIC, polypeptide 4, 90kDaprovided by HGNC
Primary source
HGNC:HGNC:4667
See related
HPRD:11998; MIM:604892
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
KAT12; TFIII90; TFIIIC90; TFIIIC290; TFIIICDELTA
See GTF3C4 in Epigenomics, MapViewer
Location:
9q34.13
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 9 NC_000009.12 (132670341..132690084)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (135545728..135565471)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene chromosome 9 open reading frame 171 Neighboring gene RNA, U5D small nuclear 2, pseudogene Neighboring gene BarH-like homeobox 1 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 31 Neighboring gene adenylate kinase 8 Neighboring gene chromosome 9 open reading frame 9

Protein interactions

Protein Gene Interaction Pubs
Tat tat HIV-1 Tat upregulates the transcription by RNA polymerase III of co-transfected or endogenous cellular Alu-repeated sequences by activating transcription factor TFIIIC PubMed

Go to the HIV-1, Human Interaction Database

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • FLJ21002, MGC138450

Gene Ontology Provided by GOA

Function Evidence Code Pubs
contributes_to DNA binding IC
Inferred by Curator
more info
PubMed 
enzyme activator activity TAS
Traceable Author Statement
more info
PubMed 
histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
nucleoplasm TAS
Traceable Author Statement
more info
 
transcription factor TFIIIC complex IDA
Inferred from Direct Assay
more info
PubMed 
Preferred Names
general transcription factor 3C polypeptide 4
Names
general transcription factor 3C polypeptide 4
TF3C-delta
TFIIIC 90 kDa subunit
general transcription factor 3C 4
transcription factor IIIC subunit delta
transcription factor IIIC 90 kDa subunit
NP_036336.2

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_012204.2NP_036336.2  general transcription factor 3C polypeptide 4

    See proteins identical to NP_036336.2

    Status: VALIDATED

    Source sequence(s)
    AK024655, AK027509, BC060821, BC112245, CX755755
    Consensus CDS
    CCDS6953.1
    UniProtKB/TrEMBL
    B3KNH2
    UniProtKB/Swiss-Prot
    Q9UKN8
    Conserved Domains (2) summary
    pfam12660
    Location:736822
    zf-TFIIIC; Putative zinc-finger of transcription factor IIIC complex
    pfam12657
    Location:61254
    TFIIIC_delta; Transcription factor IIIC subunit delta N-term

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000009.12 

    Range
    132670341..132690084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate HuRef

Genomic

  1. AC_000141.1 

    Range
    105039470..105059183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018920.2 

    Range
    135696098..135715832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)