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LOC9324047 dehydration-responsive element-binding protein 1E [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9324047, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9324047
Gene description
dehydration-responsive element-binding protein 1E
Locus tag
ARALYDRAFT_475045
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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See LOC9324047 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302554.1 (1240400..1241638)

NW_003302554.1Genomic Context describing neighboring genes Neighboring gene ethylene-responsive transcription factor ERF026 Neighboring gene uncharacterized LOC110231138 Neighboring gene uncharacterized LOC110230853 Neighboring gene DNA-directed RNA polymerase IV subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302554 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dehydration-responsive element-binding protein 1E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302554.1 Reference v.1.0 Primary Assembly

    Range
    1240400..1241638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021035532.1 → XP_020891191.1  dehydration-responsive element-binding protein 1E

    UniProtKB/TrEMBL
    D7KU34
    Conserved Domains (1) summary
    cd00018
    Location:28 → 88
    AP2; DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE), a promotor ...
Nucleotide Protein
Heading Accession and Version

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