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LOC9313583 serine/threonine-protein phosphatase PP1 isozyme 5 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9313583, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9313583
Gene description
serine/threonine-protein phosphatase PP1 isozyme 5
Locus tag
ARALYDRAFT_665439
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302551.1 (12838288..12840797, complement)

NW_003302551.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9313582 Neighboring gene uncharacterized LOC110228531 Neighboring gene ras-related protein RABA2c Neighboring gene subtilisin-like protease SBT4.5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302551 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase PP1 isozyme 5
Names
predicted protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302551.1 Reference v.1.0 Primary Assembly

    Range
    12838288..12840797 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021025600.1 → XP_020881259.1  serine/threonine-protein phosphatase PP1 isozyme 5

    UniProtKB/TrEMBL
    D7LN54
    Conserved Domains (1) summary
    cd07414
    Location:13 → 304
    MPP_PP1_PPKL; PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain

  2. XM_002877469.2 → XP_002877515.1  serine/threonine-protein phosphatase PP1 isozyme 5

    See identical proteins and their annotated locations for XP_002877515.1

    UniProtKB/TrEMBL
    D7LN54
    Conserved Domains (1) summary
    cd07414
    Location:13 → 304
    MPP_PP1_PPKL; PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain
Nucleotide Protein
Heading Accession and Version

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