U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC9313374 endoglucanase 16 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9313374, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC9313374
Gene description
endoglucanase 16
Locus tag
ARALYDRAFT_484821
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302551.1 (10509836..10512603)

NW_003302551.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At3g43530-like Neighboring gene uncharacterized LOC9313373 Neighboring gene uncharacterized LOC9311698 Neighboring gene uncharacterized LOC110228004 Neighboring gene uncharacterized LOC110228003

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003302551 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
endoglucanase 16
Names
glycosyl hydrolase family 9 protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302551.1 Reference v.1.0 Primary Assembly

    Range
    10509836..10512603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002875583.2 → XP_002875629.1  endoglucanase 16

    See identical proteins and their annotated locations for XP_002875629.1

    UniProtKB/TrEMBL
    D7LME7
    Conserved Domains (2) summary
    PLN02420
    Location:20 → 485
    PLN02420; endoglucanase
    PLN02909
    Location:7 → 488
    PLN02909; Endoglucanase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases