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LOC9310350 eukaryotic translation initiation factor 3 subunit B [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9310350, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9310350
Gene description
eukaryotic translation initiation factor 3 subunit B
Locus tag
ARALYDRAFT_489433
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
TIF3B1
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (11592464..11596066, complement)

NW_003302550.1Genomic Context describing neighboring genes Neighboring gene protein PEROXIN-4 Neighboring gene uncharacterized LOC9310348 Neighboring gene uncharacterized LOC9308251 Neighboring gene protein tesmin/TSO1-like CXC 7 Neighboring gene small RNA degrading nuclease 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 3 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 3 subunit B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302550.1 Reference v.1.0 Primary Assembly

    Range
    11592464..11596066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021022183.1 → XP_020877842.1  eukaryotic translation initiation factor 3 subunit B

    UniProtKB/TrEMBL
    D7M4L0
    Conserved Domains (2) summary
    cd12278
    Location:56 → 140
    RRM_eIF3B; RNA recognition motif in eukaryotic translation initiation factor 3 subunit B (eIF-3B) and similar proteins
    cl25541
    Location:180 → 712
    eIF2A; Eukaryotic translation initiation factor eIF2A
Nucleotide Protein
Heading Accession and Version

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