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LOC9300547 profilin-5 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9300547, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9300547
Gene description
profilin-5
Locus tag
ARALYDRAFT_918819
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302548.1 (17630957..17632175, complement)

NW_003302548.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase 6 Neighboring gene glucan endo-1,3-beta-glucosidase 13 Neighboring gene putative dual specificity protein phosphatase DSP8 Neighboring gene NAC domain-containing protein 101 Neighboring gene ATP-dependent 6-phosphofructokinase 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302548 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin monomer binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sequestering of actin monomers IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell cortex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
profilin-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302548.1 Reference v.1.0 Primary Assembly

    Range
    17630957..17632175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002866111.2 → XP_002866157.1  profilin-5

    See identical proteins and their annotated locations for XP_002866157.1

    UniProtKB/TrEMBL
    D7MLU1
    Conserved Domains (1) summary
    pfam00235
    Location:1 → 128
    Profilin
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases