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LOC9271966 major pollen allergen Ole e 10 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9271966, updated on 2-Mar-2021

Summary

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Gene symbol
LOC9271966
Gene description
major pollen allergen Ole e 10
Locus tag
OSNPB_020503350
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1126_B06.13
Expression
Broad expression in milk grains (RPKM 1.3), mature seeds (RPKM 0.5) and 4 other tissues See more
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Genomic context

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Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (17812679..17819197)

Chromosome 2 - NC_029257.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4329421 Neighboring gene cytochrome P450 71A1 Neighboring gene 60S ribosomal protein L35 Neighboring gene 3-oxoacyl-[acyl-carrier-protein] reductase 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_029257.1 Chromosome 2 Reference IRGSP-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
PLASMODESMATA CALLOSE-BINDING PROTEIN 3; major pollen allergen Ole e 10
Names
Os02g0503350
P0654A08.44
glycosyl hydrolase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029257.1 Reference IRGSP-1.0 Primary Assembly

    Range
    17812679..17819197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026023541.1 → XP_025879326.1  major pollen allergen Ole e 10 isoform X2

    Conserved Domains (1) summary
    smart00768
    Location:34 → 119
    X8; Possibly involved in carbohydrate binding

  2. XM_015767362.2 → XP_015622848.1  PLASMODESMATA CALLOSE-BINDING PROTEIN 3 isoform X1

    UniProtKB/TrEMBL
    C7IYL7
    Conserved Domains (1) summary
    smart00768
    Location:34 → 119
    X8; Possibly involved in carbohydrate binding
Nucleotide Protein
Heading Accession and Version

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