These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_001009186.1 → NP_001009186.1 T-complex protein 1 subunit zeta isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon, compared to variant 1, resulting in a shorter protein (isoform b).
- Source sequence(s)
-
AC092101, AW411253, BI464886, BU540578
- Consensus CDS
-
CCDS34640.1
- UniProtKB/TrEMBL
-
A6NCD2
- Related
- ENSP00000352019, OTTHUMP00000209314, ENST00000335503, OTTHUMT00000343286
- Conserved Domains (2) summary
-
- cd03342
Location:7 – 481
Blast Score: 1779
- TCP1_zeta; TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
- pfam00118
Location:30 – 480
Blast Score: 1038
- Cpn60_TCP1; TCP-1/cpn60 chaperonin family
-
NM_001762.3 → NP_001753.1 T-complex protein 1 subunit zeta isoform a
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AC092101, AC092579, AW411253, BI464886
- Consensus CDS
-
CCDS5523.1
- UniProtKB/Swiss-Prot
-
P40227
- Related
- ENSP00000275603, OTTHUMP00000159736, ENST00000275603, OTTHUMT00000251526
- Conserved Domains (2) summary
-
- cd03342
Location:7 – 526
Blast Score: 2053
- TCP1_zeta; TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL) ...
- pfam00118
Location:30 – 525
Blast Score: 1230
- Cpn60_TCP1; TCP-1/cpn60 chaperonin family
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000007.13 Reference GRCh37.p5 Primary Assembly
- Range
- 56119378..56131682
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000139.1 Alternate HuRef
- Range
- 55933178..55945465
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate CRA_TCAGchr7v2
Genomic
-
AC_000068.1 Alternate CRA_TCAGchr7v2
- Range
- 56123625..56135929
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)