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    ZPR_0279 3-oxoacyl-ACP synthase [ Zunongwangia profunda SM-A87 ]

    Gene ID: 9076155, updated on 15-Jun-2013
    Gene symbol
    ZPR_0279
    Gene description
    3-oxoacyl-ACP synthase
    Locus tag
    ZPR_0279
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zunongwangia profunda SM-A87 (strain: SMA-87, culture-collection: DSMZ:DSM 18752, old-name: Zunongwangia profunda)
    Lineage
    Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia
    Sequence :
    NC_014041.1 (282814..284037)

    NC_014041.1Genomic Context describing neighboring genes Neighboring gene phosphoribosylglycinamide formyltransferase Neighboring gene acyl carrier protein Neighboring gene ribonuclease III Neighboring gene hypothetical protein Neighboring gene pyruvate kinase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. The complete genome of Zunongwangia profunda SM-A87 reveals its adaptation to the deep-sea environment and ecological role in sedimentary organic nitrogen degradation. Qin QL, et al. BMC Genomics, 2010 Apr 17. PMID 20398413.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    3-oxoacyl-ACP synthase

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014041.1

      Range
      282814..284037
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003582835.1 3-oxoacyl-ACP synthase [Zunongwangia profunda SM-A87]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D5BDP8
      Conserved Domains (2) summary
      TIGR03150
      Location:1 – 403
      Blast Score: 1624
      fabF; beta-ketoacyl-acyl-carrier-protein synthase II
      cd00834
      Location:1 – 402
      Blast Score: 1430
      KAS_I_II; Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen ...
    Nucleotide Protein
    Heading Accession and Version
    genomic CP001650.1 ADF50639.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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