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    CCNE1 cyclin E1 [ Homo sapiens (human) ]

    Gene ID: 898, updated on 19-May-2013
    Official Symbol
    CCNE1provided by HGNC
    Official Full Name
    cyclin E1provided by HGNC
    Primary source
    HGNC:1589
    See related
    Ensembl:ENSG00000105173; HPRD:00455; MIM:123837; Vega:OTTHUMG00000177626
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    CCNE
    Summary
    The protein encoded by this gene belongs to the highly conserved cyclin family, whose members are characterized by a dramatic periodicity in protein abundance through the cell cycle. Cyclins function as regulators of CDK kinases. Different cyclins exhibit distinct expression and degradation patterns which contribute to the temporal coordination of each mitotic event. This cyclin forms a complex with and functions as a regulatory subunit of CDK2, whose activity is required for cell cycle G1/S transition. This protein accumulates at the G1-S phase boundary and is degraded as cells progress through S phase. Overexpression of this gene has been observed in many tumors, which results in chromosome instability, and thus may contribute to tumorigenesis. This protein was found to associate with, and be involved in, the phosphorylation of NPAT protein (nuclear protein mapped to the ATM locus), which participates in cell-cycle regulated histone gene expression and plays a critical role in promoting cell-cycle progression in the absence of pRB. Two alternatively spliced transcript variants of this gene, which encode distinct isoforms, have been described. Two additional splice variants were reported but detailed nucleotide sequence information is not yet available. [provided by RefSeq, Jul 2008]
    Location :
    19q12
    Sequence :
    Chromosome: 19; NC_000019.9 (30302901..30315215)
    See CCNE1 in Epigenomics, MapViewer

    Chromosome 19 - NC_000019.9Genomic Context describing neighboring genes Neighboring gene pleckstrin homology domain containing, family F (with FYVE domain) member 1 Neighboring gene chromosome 19 open reading frame 12 Neighboring gene peptidylprolyl isomerase A (cyclophilin A) pseudogene Neighboring gene URI1, prefoldin-like chaperone Neighboring gene ribosomal protein L9 pseudogene 32

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Protein Gene Interaction Pubs
    Envelope surface glycoprotein gp120 env The V3 loop of HIV-1 gp120 induces G1 arrest in IL-2-dependent cell cycle progression by reducing cyclin E expression and phosphorylation of retinoblastoma protein (pRb) PubMed
    Nef, p27 nef HIV-1 Nef induces the downregulation of cyclin E expression in podocytes PubMed
    Tat, p14 tat HIV-1 Tat 41/44 peptide TAALS from the core domain of Tat inhibits Tat-mediated HIV-1 gene expression and replication by binding the Cdk2/Cyclin E complex and inhibiting the phosphorylation of serine 5 of RNAPII PubMed
    tat Cdk2/cyclin E stimulates Tat-dependent HIV-1 transcription PubMed
    tat HIV-1 Tat induces Cyclin E-associated cdk activity in lymphocytes, indicating Tat drives cells to the late G1 phase of the cell cycle PubMed
    tat HIV-1 Tat induces a G1 arrest in cells of glial origin, leading to a downregulation of cyclin E-Cdk2 kinase activity and phosphorylation of Rb PubMed

    Go to the HIV-1, Human Protein Interaction Database

    Products Interactant Other Gene Complex Source Pubs Description
    NP_001229.1 NP_361014.1 FBXW7    BIND  PubMed hCDC4 interacts with cyclin E. This interaction was modelled on a demonstrated interaction between human CDC4 and cyclin E from an unspecified species. 
    NP_476530.1 NP_060785.2 FBXW7    BIND  PubMed Phosphorylated cycE interacts with Fbw7. This interaction was modeled on a demonstrated interaction between cycE from human and Fbw7 from an unspecified species. 
    P24864 P10275 AR    HPRD  PubMed  
    P24864 P51587 BRCA2    HPRD  PubMed  
    P24864 Q8TDN4 CABLES1    HPRD  PubMed  
    P24864 Calmodulin 1 CALM1    HPRD  PubMed  
    P24864 P50991 CCT4    HPRD  PubMed  
    P24864 P30304 CDC25A    HPRD  PubMed  
    P24864 P06493 CDK1    HPRD  PubMed  
    P24864 P24941 CDK2    HPRD  PubMed  
    P24864 Q00526 CDK3    HPRD  PubMed  
    P24864 P38936 CDKN1A    HPRD  PubMed  
    P24864 P38432 COIL    HPRD  PubMed  
    P24864 Q13618 CUL3    HPRD  PubMed  
    P24864 Q969H0 FBXW7    HPRD  PubMed  
    P24864 P49841 GSK3B    HPRD  PubMed  
    P24864 Q9UII4 HERC5    HPRD  PubMed  
    P24864 P49959 MRE11A    HPRD  PubMed  
    P24864 P10244 MYBL2    HPRD  PubMed  
    P24864 O60934 NBN    HPRD  PubMed  
    P24864 Q13526 PIN1    HPRD  PubMed  
    P24864 P10644 PRKAR1A    HPRD  PubMed  
    P24864 P28749 RBL1    HPRD  PubMed  
    P24864 Q08999 RBL2    HPRD  PubMed  
    P24864 Q04864 REL    HPRD  PubMed  
    P24864 Q13309 SKP2    HPRD  PubMed  
    P24864 P51532 SMARCA4    HPRD  PubMed  
    P24864 Q92922 SMARCC1    HPRD  PubMed  
    P24864 Q6STE5 SMARCD3    HPRD  PubMed  
    BioGRID:107338 BioGRID:115445 AKAP9    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:106862 AR    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:113696 ARHGEF5    BioGRID  PubMed Two-hybrid 
    BioGRID:107338 BioGRID:111861 ARID4A    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:107140 BRCA1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:114457 BTRC    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:107252 CALM1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:115827 CCT2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:107428 CDC25A    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107338 BioGRID:107432 CDC34    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:107426 CDC6    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:107420 CDK1    BioGRID  PubMed Affinity Capture-Western; Co-purification 
    BioGRID:107338 BioGRID:107452 CDK2    BioGRID  PubMed Affinity Capture-Western; Co-fractionation; Co-purification; Reconstituted Complex 
    BioGRID:107338 BioGRID:107454 CDK4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:107456 CDK6    BioGRID  PubMed Affinity Capture-Western 
    NP_000380.1 CDKN1A    BIND  PubMed p21 interacts with cyclin E. 
    NP_000380.1 CDKN1A    BIND  PubMed CDKN1A (p21) interacts with CCNE1 (cyclin E). 
    BioGRID:107338 BioGRID:107460 CDKN1A    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex; Two-hybrid 
    NP_004055.1 CDKN1B    BIND  PubMed p27 interacts with Cyc E. 
    NP_004055.1 CDKN1B    BIND  PubMed p27 interacts with cyclin E. 
    BioGRID:107338 BioGRID:107461 CDKN1B    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex 
    BioGRID:107338 BioGRID:123555 CDT1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:107495 CETN1    BioGRID  PubMed Co-fractionation 
    BioGRID:107338 BioGRID:107574 CISH    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:113815 COIL    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:107777 CREBBP    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:114032 CUL1    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:114030 CUL3    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
    BioGRID:107338 BioGRID:114029 CUL4A    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:114028 CUL4B    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:107338 BioGRID:198644 Cdk2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:198652 Cdkn1b    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107338 BioGRID:108201 E2F1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:108206 E2F4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:120581 FBXW7    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Co-crystal Structure; Protein-peptide; Reconstituted Complex 
    BioGRID:107338 BioGRID:108594 FOXM1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:107338 BioGRID:109187 GSK3B    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:109260 H1F0    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:119365 HERC5    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107338 BioGRID:109275 HIST1H1A    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:107338 BioGRID:109264 HIST1H1B    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:110257 MARCKS    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:110340 MCM3    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107338 BioGRID:110501 MRE11A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:110763 NBN    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:110867 NFYB    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:110924 NPAT    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Reconstituted Complex 
    BioGRID:107338 BioGRID:111105 PARK2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:111317 PIN1    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107338 BioGRID:111420 POLD1    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity 
    BioGRID:107338 BioGRID:114517 PRC1    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:111559 PRKAR1A    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:111660 PSMA6    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:111860 RB1    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:111868 RBL1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:111869 RBL2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:115301 RBX1    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:120102 RRN3    BioGRID  PubMed Reconstituted Complex 
    BioGRID:107338 BioGRID:117017 SF3B1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:112393 SKP2    BioGRID  PubMed Affinity Capture-Western; Reconstituted Complex 
    BioGRID:107338 BioGRID:112479 SMARCA2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:112481 SMARCA4    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:112482 SMARCB1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:112483 SMARCC1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:205208 Skp2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:113134 TUBG1    BioGRID  PubMed Co-fractionation 
    BioGRID:107338 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:107338 BioGRID:113190 UBTF    BioGRID  PubMed Biochemical Activity 
    BioGRID:107338 BioGRID:125434 UHRF2    BioGRID  PubMed Affinity Capture-Western; Biochemical Activity; Far Western; Reconstituted Complex 
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      Cell Cycle, organism-specific biosystem
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      E2F transcription factor network, organism-specific biosystem
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    • G0 and Early G1, organism-specific biosystem (from REACTOME)
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    • G1 to S cell cycle control, organism-specific biosystem (from WikiPathways)
      G1 to S cell cycle control, organism-specific biosystemIn the G1 phase there are two types of DNA damage responses, the p53-dependent and the p53-independent pathways. The p53-dependent responses inhibit CDKs through the up-regulation of genes encoding C...
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      G1/S DNA Damage Checkpoints, organism-specific biosystemIn the G1 phase there are two types of DNA damage responses, the p53-dependent and the p53-independent pathways. The p53-dependent responses inhibit CDKs through the up-regulation of genes encoding ...
    • G1/S Transition, organism-specific biosystem (from REACTOME)
      G1/S Transition, organism-specific biosystemCyclin E - Cdk2 complexes control the transition from G1 into S-phase. In this case, the binding of p21Cip1/Waf1 or p27kip1 is inhibitory. Important substrates for Cyclin E - Cdk2 complexes include p...
    • G1/S-Specific Transcription, organism-specific biosystem (from REACTOME)
      G1/S-Specific Transcription, organism-specific biosystemThe E2F family of transcription factors regulate the transition from the G1 to the S phase in the cell cycle. E2F activity is regulated by members of the retinoblastoma protein (pRb) family, resultin...
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    Markers

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    androgen receptor binding NAS
    Non-traceable Author Statement
    more info
    PubMed 
    cyclin-dependent protein serine/threonine kinase regulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    protein kinase binding IEA
    Inferred from Electronic Annotation
    more info
     
    transcription coactivator activity NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    DNA replication initiation IEA
    Inferred from Electronic Annotation
    more info
     
    G1/S transition of mitotic cell cycle NAS
    Non-traceable Author Statement
    more info
    PubMed 
    G1/S transition of mitotic cell cycle TAS
    Traceable Author Statement
    more info
     
    Wnt receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    androgen receptor signaling pathway NAS
    Non-traceable Author Statement
    more info
    PubMed 
    cell division IEA
    Inferred from Electronic Annotation
    more info
     
    mitotic cell cycle TAS
    Traceable Author Statement
    more info
     
    positive regulation of transcription, DNA-dependent NAS
    Non-traceable Author Statement
    more info
    PubMed 
    protein phosphorylation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of cyclin-dependent protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    regulation of transcription involved in G1/S phase of mitotic cell cycle TAS
    Traceable Author Statement
    more info
     
    Component Evidence Code Pubs
    cyclin-dependent protein kinase holoenzyme complex IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol TAS
    Traceable Author Statement
    more info
     
    NOT nucleolus IDA
    Inferred from Direct Assay
    more info
     
    nucleoplasm TAS
    Traceable Author Statement
    more info
     
    nucleus IDA
    Inferred from Direct Assay
    more info
     
    nucleus NAS
    Non-traceable Author Statement
    more info
     
    Preferred Names
    G1/S-specific cyclin-E1
    Names
    G1/S-specific cyclin-E1
    cyclin Es
    cyclin Et

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001238.2NP_001229.1  G1/S-specific cyclin-E1

      Status: REVIEWED

      Source sequence(s)
      AK291549, BC035498
      Consensus CDS
      CCDS12419.1
      UniProtKB/Swiss-Prot
      P24864
      Related
      ENSP00000262643, OTTHUMP00000257268, ENST00000262643, OTTHUMT00000438138
      Conserved Domains (2) summary
      cd00043
      Location:144234
      Blast Score: 189
      CYCLIN; Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control. Present in cyclins, TFIIB and Retinoblastoma (RB).The cyclins consist of 8 classes of cell cycle regulators that regulate cyclin dependent kinases (CDKs). TFIIB ...
      pfam02984
      Location:293363
      Blast Score: 106
      Cyclin_C; Cyclin, C-terminal domain

    RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 104

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p10 Primary Assembly

    Genomic

    1. NC_000019.9 Reference GRCh37.p10 Primary Assembly

      Range
      30302901..30315215
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000151.1 Alternate HuRef

      Range
      26814506..26826846
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CHM1_1.0

    Genomic

    1. NC_018930.1 Alternate CHM1_1.0

      Range
      30463301..30475535
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_057182.1: Suppressed sequence

      Description
      NM_057182.1: This RefSeq was suppressed due to concerns that it is 5' partial.

      Supplemental Content

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