Sign in to NCBI

Display Settings:

Format

Send to:

Choose Destination
We are sorry, but NCBI web applications do not support your browser and may not function properly. More information

    jhp0148 hypothetical protein [ Helicobacter pylori J99 ]

    Gene ID: 889026, updated on 8-May-2013
    Gene symbol
    jhp0148
    Gene description
    hypothetical protein
    Locus tag
    jhp0148
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Helicobacter pylori J99 (strain: J99)
    Lineage
    Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
    Sequence :
    NC_000921.1 (162372..163289)

    NC_000921.1Genomic Context describing neighboring genes Neighboring gene shikimate kinase Neighboring gene hypothetical protein Neighboring gene lipopolysaccharide biosynthesis protein Neighboring gene hypothetical protein Neighboring gene delta-aminolevulinic acid dehydratase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Growth phase-dependent response of Helicobacter pylori to iron starvation. Merrell DS, et al. Infect Immun, 2003 Nov. PMID 14573673.
    2. Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori. Alm RA, et al. Nature, 1999 Jan 14. PMID 9923682.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    hypothetical protein
    NP_222869.1
    • similar to H. pylori 26695 gene HP0160

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000921.1

      Range
      162372..163289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_222869.1 hypothetical protein jhp0148 [Helicobacter pylori J99]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q9ZMS0
      Conserved Domains (3) summary
      smart00671
      Location:242 – 274
      Blast Score: 98
      SEL1; Sel1-like repeats
      COG0790
      Location:31 – 283
      Blast Score: 376
      COG0790; FOG: TPR repeat, SEL1 subfamily [General function prediction only]
      cl02723
      Location:170 – 203
      Blast Score: 77
      Sel1; Sel1 repeat
    Nucleotide Protein
    Heading Accession and Version
    genomic AE001439.1 AAD05729.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZMS0.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Books
        Links between Entrez Gene and 'Books' are established if a GeneID is explicitly referenced in a book.
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • GEO Profiles
        Related GEO
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

      Related sites

      Feedback

      Subscription

      Recent activity

      Clear Turn Off Turn On

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...