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vapC2 ribonuclease VapC2 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 886586, updated on 4-Apr-2024

Summary

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Gene symbol
vapC2
Gene description
ribonuclease VapC2
Locus tag
Rv0301
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (364044..364469)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene PE-PGRS family protein PE_PGRS5 Neighboring gene antitoxin Neighboring gene toxin Neighboring gene antitoxin VapB2 Neighboring gene transcriptional regulator Neighboring gene dehydrogenase/reductase Neighboring gene PPE family protein PPE5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribonuclease VapC2
NP_214815.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv0300, contains PIN domain. This region is a possible MT-complex-specific genomic island (See Becq et al., 2007 PMID:17545187).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    364044..364469
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_214815.1 ribonuclease VapC2 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_214815.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H1SIK4, A0A0H3LBZ2, A0A7U4BRP9
    Conserved Domains (1) summary
    cd18755
    Location:7 → 135
    PIN_MtVapC3_VapC21-like; VapC-like PIN domain of Mycobacterium tuberculosis VapC3, VapC21 and related proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WFB9.1

Gene LinkOut

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Molecular Biology Databases
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