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Rv1478 peptidoglycan endopeptidase RipB [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 886535, updated on 6-Oct-2023

Summary

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Gene symbol
Rv1478
Gene description
peptidoglycan endopeptidase RipB
Locus tag
Rv1478
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (1668419..1669144)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene membrane protein Neighboring gene peptidoglycan endopeptidase RipA Neighboring gene transcriptional regulator MoxR1 Neighboring gene hypothetical protein Neighboring gene membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Peptidoglycan remodeling in Mycobacterium tuberculosis: comparison of structures and catalytic activities of RipA and RipB. Böth D, et al. J Mol Biol, 2011 Oct 14. PMID 21864539
  2. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  3. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  4. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Both RipA (Rv1477) and RipB (Rv1478) are able to bind peptidoglycan.
    Title: Peptidoglycan remodeling in Mycobacterium tuberculosis: comparison of structures and catalytic activities of RipA and RipB.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
peptidoglycan endopeptidase RipB
NP_215994.1
  • invasion protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    1668419..1669144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_215994.1 peptidoglycan endopeptidase RipB [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_215994.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A654T9S7
    Conserved Domains (1) summary
    NF033742
    Location:31 → 241
    NlpC_p60_RipB; NlpC/P60 family peptidoglycan endopeptidase RipB
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WHU5.1

Gene LinkOut

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Molecular Biology Databases