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vapC13 ribonuclease VapC13 [ Mycobacterium tuberculosis H37Rv ]

Gene ID: 885744, updated on 11-Dec-2020

Summary

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Gene symbol
vapC13
Gene description
ribonuclease VapC13
Locus tag
Rv1838c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mycobacterium tuberculosis H37Rv (strain: H37Rv, type-material: type strain of Mycobacterium tuberculosis)
Lineage
Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex
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Genomic context

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Sequence:
NC_000962.3 (2087257..2087652, complement)

NC_000962.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene malate synthase Neighboring gene PE-PGRS family protein PE_PGRS34 Neighboring gene antitoxin VapB13 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000962.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TubercuList--10 years after. Lew JM, et al. Tuberculosis (Edinb), 2011 Jan. PMID 20980199
  2. Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv. Camus JC, et al. Microbiology (Reading), 2002 Oct. PMID 12368430
  3. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Cole ST, et al. Nature, 1998 Jun 11. PMID 9634230

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ribonuclease VapC13
NP_216354.1
  • toxin, part of toxin-antitoxin (TA) operon with Rv1839c, contains PIN domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000962.3 Reference assembly

    Range
    2087257..2087652 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_216354.1 ribonuclease VapC13 [Mycobacterium tuberculosis H37Rv]

    See identical proteins and their annotated locations for NP_216354.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P9WFA1
    UniProtKB/TrEMBL
    I6Y7M1
    Conserved Domains (1) summary
    COG1848
    Location:1 → 130
    COG1848; Predicted nucleic acid-binding protein, contains PIN domain [General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P9WFA1.1

Gene LinkOut

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Molecular Biology Databases