Display Settings:

Format

Send to:

Choose Destination

    ANKRD13A ankyrin repeat domain 13A [ Homo sapiens ]

    Gene ID: 88455, updated on 11-May-2012

    Summary

    Official Symbol
    ANKRD13Aprovided by HGNC
    Official Full Name
    ankyrin repeat domain 13Aprovided by HGNC
    Primary source
    HGNC:21268
    See related
    Ensembl:ENSG00000076513; HPRD:12458; Vega:OTTHUMG00000169314
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ANKRD13; NY-REN-25

    Genomic context

    Location :
    12q24.11
    Sequence :
    Chromosome: 12; NC_000012.11 (110437235..110477237)
    See ANKRD13A in Epigenomics, MapViewer

    Chromosome 12 - NC_000012.11Genomic Context describing neighboring genes Neighboring gene trichoplein, keratin filament binding Neighboring gene G protein-coupled receptor kinase interacting ArfGAP 2 Neighboring gene chromosome 12 open reading frame 76 Neighboring gene intraflagellar transport 81 homolog (Chlamydomonas)

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    Q8IZ07 Q13571 LAPTM5    HPRD  PubMed  
    BioGRID:124582 BioGRID:119978 TOLLIP    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:124582 BioGRID:113164 UBC    BioGRID  PubMed Affinity Capture-MS 

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    ankyrin repeat domain-containing protein 13A
    Names
    ankyrin repeat domain-containing protein 13A
    NY-REN-25 antigen

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_033121.1NP_149112.1  ankyrin repeat domain-containing protein 13A

      Status: VALIDATED

      Source sequence(s)
      AF155103, BC032833, BC057817
      Consensus CDS
      CCDS9140.1
      UniProtKB/TrEMBL
      Q3ZTS7
      UniProtKB/Swiss-Prot
      Q8IZ07
      UniProtKB/TrEMBL
      Q9Y5A3
      Related
      ENSP00000261739, OTTHUMP00000240752, ENST00000261739, OTTHUMT00000403430
      Conserved Domains (3) summary
      cd00204
      Location:4101
      Blast Score: 205
      ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
      pfam11904
      Location:156471
      Blast Score: 937
      GPCR_chapero_1; GPCR-chaperone
      pfam12796
      Location:1396
      Blast Score: 149
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: Build 37.3

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh37.p5 Primary Assembly

    Genomic

    1. NC_000012.11 Reference GRCh37.p5 Primary Assembly

      Range
      110437235..110477237
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate HuRef

    Genomic

    1. AC_000144.1 Alternate HuRef

      Range
      107452978..107493242
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic AC007546.6 (2005..28903) None
    genomic AC084876.19 None
    genomic CH471054.1 EAW97891.1
      EAW97892.1
      EAW97893.1
    mRNA AF064604.1 AAC17109.1
    mRNA AF155103.1 AAD42869.1
    mRNA AK022658.1 BAG51101.1
    mRNA AK025261.1 None
    mRNA AK095130.1 BAG52990.1
    mRNA AK130522.1 None
    mRNA AK293232.1 BAG56771.1
    mRNA AK302535.1 BAG63807.1
    mRNA AK308923.1 None
    mRNA AY364251.1 AAQ76810.1
    mRNA BC032833.2 AAH32833.2
    mRNA BC057817.1 None
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3ZTS7 GenPept UniProtKB/TrEMBL:Q3ZTS7
    Q8IZ07.3 GenPept UniProtKB/Swiss-Prot:Q8IZ07
    Q9Y5A3 GenPept UniProtKB/TrEMBL:Q9Y5A3

      Supplemental Content

      Recent activity

      Your browsing activity is empty.

      Activity recording is turned off.

      Turn recording back on

      See more...