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    Gobs_4331 dTDP-glucose 4,6-dehydratase [ Geodermatophilus obscurus DSM 43160 ]

    Gene ID: 8756025, updated on 18-May-2013
    Gene symbol
    Gobs_4331
    Gene description
    dTDP-glucose 4,6-dehydratase
    Locus tag
    Gobs_4331
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Geodermatophilus obscurus DSM 43160 (strain: DSM 43160)
    Lineage
    Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Frankineae; Geodermatophilaceae; Geodermatophilus
    Sequence :
    NC_013757.1 (4556046..4557041, complement)

    NC_013757.1Genomic Context describing neighboring genes Neighboring gene LGFP repeat-containing protein Neighboring gene hypothetical protein Neighboring gene LGFP repeat-containing protein Neighboring gene dTDP-4-dehydrorhamnose reductase Neighboring gene acylneuraminate cytidylyltransferase Neighboring gene UDP-N-acetyl-D-glucosamine 2-epimerase Neighboring gene N-acylneuraminate-9-phosphate synthase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Complete genome sequence of Geodermatophilus obscurus type strain (G-20). Ivanova N, et al. Stand Genomic Sci, 2010 Mar 30. PMID 21304698.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    dTDP-glucose 4,6-dehydratase
    YP_003411264.1
    • TIGRFAM: dTDP-glucose 4,6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase~KEGG: ace:Acel_0415 dTDP-glucose 4,6-dehydratase

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013757.1

      Range
      4556046..4557041, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003411264.1 dTDP-glucose 4,6-dehydratase [Geodermatophilus obscurus DSM 43160]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D2SG25
      Conserved Domains (2) summary
      cd05246
      Location:1 – 316
      Blast Score: 1254
      dTDP_GD_SDR_e; dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs
      COG1088
      Location:1 – 323
      Blast Score: 1150
      RfbB; dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
    Nucleotide Protein
    Heading Accession and Version
    genomic CP001867.1 ADB76893.1
    Protein Accession Links
    GenPept Link UniProtKB Link
    EEI32193.1 GenPept

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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