Format

Send to:

Choose Destination

Slin_4767 isocitrate dehydrogenase [ Spirosoma linguale DSM 74 ]

Gene ID: 8728531, discontinued on 4-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
Slin_4767
Gene description
isocitrate dehydrogenase
Locus tag
Slin_4767
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Spirosoma linguale DSM 74 (strain: DSM 74)
Lineage
Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • 2-Oxocarboxylic acid metabolism, organism-specific biosystem (from KEGG)
    2-Oxocarboxylic acid metabolism, organism-specific biosystem2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate)...
  • 2-Oxocarboxylic acid metabolism, conserved biosystem (from KEGG)
    2-Oxocarboxylic acid metabolism, conserved biosystem2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate)...
  • Biosynthesis of amino acids, organism-specific biosystem (from KEGG)
    Biosynthesis of amino acids, organism-specific biosystemThis map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module fo...
  • Biosynthesis of amino acids, conserved biosystem (from KEGG)
    Biosynthesis of amino acids, conserved biosystemThis map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module fo...
  • Carbon metabolism, organism-specific biosystem (from KEGG)
    Carbon metabolism, organism-specific biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
  • Carbon metabolism, conserved biosystem (from KEGG)
    Carbon metabolism, conserved biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
  • Citrate cycle (TCA cycle), organism-specific biosystem (from KEGG)
    Citrate cycle (TCA cycle), organism-specific biosystemThe citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form ...
  • Citrate cycle (TCA cycle), conserved biosystem (from KEGG)
    Citrate cycle (TCA cycle), conserved biosystemThe citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form ...
  • Glutathione metabolism, organism-specific biosystem (from KEGG)
    Glutathione metabolism, organism-specific biosystem
    Glutathione metabolism
  • Glutathione metabolism, conserved biosystem (from KEGG)
    Glutathione metabolism, conserved biosystem
    Glutathione metabolism
Names
isocitrate dehydrogenase
YP_003389544.1
  • KEGG: bba:Bd3723 isocitrate dehydrogenase
    TIGRFAM: isocitrate dehydrogenase, NADP-dependent
    PFAM: isocitrate/isopropylmalate dehydrogenase

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013730.1 Reference assembly

    Range
    5805538..5806755
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003389544.1 isocitrate dehydrogenase [Spirosoma linguale DSM 74]

    Status: PROVISIONAL