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    pcaB 3-carboxy-cis,cis-muconate cycloisomerase [ Xanthomonas albilineans GPE PC73 ]

    Gene ID: 8702934, updated on 11-May-2013
    Gene symbol
    pcaB
    Gene description
    3-carboxy-cis,cis-muconate cycloisomerase
    Locus tag
    XALc_3028
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xanthomonas albilineans GPE PC73 (strain: GPE PC73)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas
    Sequence :
    NC_013722.1 (3580337..3581689, complement)

    NC_013722.1Genomic Context describing neighboring genes Neighboring gene 4-carboxymuconolactone decarboxylase Neighboring gene 3-oxoadipate enol-lactonase Neighboring gene protocatechuate 3,4-dioxygenase subunit alpha Neighboring gene protocatechuate 3,4-dioxygenase, beta subunit protein

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae. Pieretti I, et al. BMC Genomics, 2009 Dec 17. PMID 20017926.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    3-carboxy-cis,cis-muconate cycloisomerase
    YP_003377499.1

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013722.1

      Range
      3580337..3581689, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003377499.1 3-carboxy-cis,cis-muconate cycloisomerase [Xanthomonas albilineans GPE PC73]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D2UGJ4
      Conserved Domains (2) summary
      cd01597
      Location:7 – 446
      Blast Score: 1064
      pCLME; prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like
      PRK09053
      Location:1 – 448
      Blast Score: 1284
      PRK09053; 3-carboxy-cis,cis-muconate cycloisomerase; Provisional
    Nucleotide Protein
    Heading Accession and Version
    genomic FP565176.1 CBA17505.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • BioSystems
        BioSystems
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

      General information

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