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tpiA triose phosphate isomerase [ Dictyostelium discoideum AX4 ]

Gene ID: 8619579, updated on 23-Nov-2023

Summary

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Gene symbol
tpiA
Gene description
triose phosphate isomerase
Primary source
dictyBase:DDB_G0274471
Locus tag
DDB_G0274471
Gene type
protein coding
RNA name
triose phosphate isomerase
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0167678; DDBDRAFT_0231425; DDB_0167678; DDB_0231425
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Genomic context

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Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_007088.5 (4481626..4482490)

Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007088.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by dictyBase

Function Evidence Code Pubs
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables triose-phosphate isomerase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables triose-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
  
enables triose-phosphate isomerase activity ISS
Inferred from Sequence or Structural Similarity
more info
  
Process Evidence Code Pubs
involved_in gluconeogenesis IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
  
involved_in glyceraldehyde-3-phosphate biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in glycerol catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in glycolytic process IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within glycolytic process ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Names
triose phosphate isomerase
triosephosphate isomerase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007088.5 Reference assembly

    Range
    4481626..4482490
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_639058.1 → XP_644150.1  triose phosphate isomerase [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_644150.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q555C3, Q869R8
    Conserved Domains (1) summary
    PTZ00333
    Location:4 → 256
    PTZ00333; triosephosphate isomerase; Provisional
Nucleotide Protein
Heading Accession and Version

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