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    slyA transcriptional regulator [ Edwardsiella tarda EIB202 ]

    Gene ID: 8608031, updated on 17-Oct-2012
    Gene symbol
    slyA
    Gene description
    transcriptional regulator
    Locus tag
    ETAE_1684
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Edwardsiella tarda EIB202 (strain: EIB202)
    Lineage
    Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Edwardsiella
    Sequence :
    NC_013508.1 (1791956..1792333)

    NC_013508.1Genomic Context describing neighboring genes Neighboring gene lactoylglutathione lyase Neighboring gene hypothetical protein Neighboring gene outer membrane lipoprotein Neighboring gene anhydro-N-acetylmuramic acid kinase

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details

    Related articles in PubMed

    1. Genome sequence of the versatile fish pathogen Edwardsiella tarda provides insights into its adaptation to broad host ranges and intracellular niches. Wang Q, et al. PLoS One, 2009 Oct 29. PMID 19865481.

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
    Names
    transcriptional regulator

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013508.1

      Range
      1791956..1792333
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_003295734.1 transcriptional regulator [Edwardsiella tarda EIB202]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      D0Z7V4
      Conserved Domains (2) summary
      smart00347
      Location:4 – 105
      Blast Score: 218
      HTH_MARR; helix_turn_helix multiple antibiotic resistance protein
      pfam01047
      Location:11 – 70
      Blast Score: 134
      MarR; MarR family
    Nucleotide Protein
    Heading Accession and Version
    genomic CP001135.1 ACY84523.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases

      Supplemental Content

      Table of contents

      Related information

      • BioProjects
        BioProjects related to a gene
      • Conserved Domains
        Conserved Domain Database Links between Entrez Gene and Conserved Domain Database (CDD) are calculated from the domains annotated by the CDD group on Reference Sequence proteins.
      • Full text in PMC
        PMC links
      • Full text in PMC_nucleotide
        Full text in PubMedCentral identified from shared sequence links
      • Genome
        Genome records having the gene annotated on corresponding genomic reference sequence.
      • Nucleotide
        Link to related Nucleotide entry
      • Protein
        Link to related protein entry
      • Protein Clusters
        Related Protein Clusters
      • PubMed
        Links between Gene and PubMed are the result of the following: 1. Manual curation within NCBI. Part of the process of generating a REVIEWED RefSeq is an analysis of the current literature. Papers that are seminal in defining the gene, its sequence, and its function are added to the record at that time. Alert users point out gaps or errors in papers associated with a Gene record. These messages are reviewed and implemented as required. 2. Integration of information from other public databases. Gene integrates gene-citation from resources external to NCBI such as model organism-specific databases, Gene Ontology (GO), groups curating interactions, and sequence databases. The assumption in using these source is that they report citations specific to a gene in a known species. Gene does not process citations from OMIM automatically, because many of citations in OMIM refer to studies of genes in species other than human.
      • PubMed(nucleotide/PMC)
        Citations in PubMed identified from shared sequence and PMC links.
      • RefSeq Proteins
        Link to Protein RefSeqs
      • Taxonomy
        Link to related taxonomy entry

      Links to other resources

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