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RDH16 retinol dehydrogenase 16 (all-trans) [ Homo sapiens (human) ]

Gene ID: 8608, updated on 30-Oct-2014
Official Symbol
RDH16provided by HGNC
Official Full Name
retinol dehydrogenase 16 (all-trans)provided by HGNC
Primary source
HGNC:HGNC:29674
See related
HPRD:10208
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RODH-4; SDR9C8
See RDH16 in Epigenomics, MapViewer
Location:
12q13.3
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCh38 (GCF_000001405.26) 12 NC_000012.12 (56951431..56959374, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (57345215..57353158, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene short chain dehydrogenase/reductase family 9C, member 7 Neighboring gene retinol dehydrogenase 16 (all-trans) pseudogene Neighboring gene retinol dehydrogenase 16 (all-trans) pseudogene Neighboring gene G protein-coupled receptor 182

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
electron carrier activity TAS
Traceable Author Statement
more info
PubMed 
retinol dehydrogenase activity TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
lipid metabolic process TAS
Traceable Author Statement
more info
PubMed 
oxidation-reduction process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
intracellular membrane-bounded organelle TAS
Traceable Author Statement
more info
PubMed 
Preferred Names
retinol dehydrogenase 16
Names
retinol dehydrogenase 16
sterol/retinol dehydrogenase
retinol dehydrogenase 16 (all-trans and 13-cis)
microsomal NAD+-dependent retinol dehydrogenase 4
microsomal NAD(+)-dependent retinol dehydrogenase 4
short chain dehydrogenase/reductase family 9C, member 8

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_003708.3NP_003699.3  retinol dehydrogenase 16

    See proteins identical to NP_003699.3

    Status: VALIDATED

    Source sequence(s)
    AC026120, AF057034, AW449664
    Consensus CDS
    CCDS41797.1
    UniProtKB/Swiss-Prot
    O75452
    Conserved Domains (2) summary
    PRK06179
    Location:30304
    PRK06179; short chain dehydrogenase; Provisional
    cl09931
    Location:30305
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 106

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38 Primary Assembly

Genomic

  1. NC_000012.12 

    Range
    56951431..56959374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005269205.1XP_005269262.1  

    Conserved Domains (1) summary
    cl09931
    Location:46160
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

Alternate HuRef

Genomic

  1. AC_000144.1 

    Range
    54383970..54390173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CHM1_1.1

Genomic

  1. NC_018923.2 

    Range
    57312965..57319168
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)