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ECU02_1220 DNA LIGASE [ Encephalitozoon cuniculi GB-M1 ]

Gene ID: 858637, updated on 30-Sep-2014
Gene symbol
ECU02_1220
Gene description
DNA LIGASE
Locus tag
ECU02_1220
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Encephalitozoon cuniculi GB-M1 (strain: GB-M1)
Lineage
Eukaryota; Fungi; Microsporidia; Unikaryonidae; Encephalitozoon
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003229.1 (143949..145718)

Chromosome II - NC_003229.1Genomic Context describing neighboring genes Neighboring gene similarity to homeobox domain-containing protein Neighboring gene GLUTAMYL tRNA SYNTHETASE Neighboring gene similarity to SEC24-related protein (COPII coat) Neighboring gene 13S CONDENSIN SUBUNIT

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • DNA replication, organism-specific biosystem (from KEGG)
    DNA replication, organism-specific biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • DNA replication, conserved biosystem (from KEGG)
    DNA replication, conserved biosystemA complex network of interacting proteins and enzymes is required for DNA replication. Generally, DNA replication follows a multistep enzymatic pathway. At the DNA replication fork, a DNA helicase (D...
  • Mismatch repair, organism-specific biosystem (from KEGG)
    Mismatch repair, organism-specific biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Mismatch repair, conserved biosystem (from KEGG)
    Mismatch repair, conserved biosystemDNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preven...
  • Nucleotide excision repair, organism-specific biosystem (from KEGG)
    Nucleotide excision repair, organism-specific biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...
  • Nucleotide excision repair, conserved biosystem (from KEGG)
    Nucleotide excision repair, conserved biosystemNucleotide excision repair (NER) is a mechanism to recognize and repair bulky DNA damage caused by compounds, environmental carcinogens, and exposure to UV-light. In humans hereditary defects in the ...

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003229.1 

    Range
    143949..145718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001040836.1NP_584647.1  DNA LIGASE [Encephalitozoon cuniculi GB-M1]

    See proteins identical to NP_584647.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q8SSE3
    Conserved Domains (4) summary
    cd07969
    Location:437577
    OBF_DNA_ligase_I; The Oligonucleotide/oligosaccharide binding (OB)-fold domain of ATP-dependent DNA ligase I is a DNA-binding module that is part of the catalytic core unit
    cd07900
    Location:219432
    Adenylation_DNA_ligase_I_Euk; Adenylation domain of eukaryotic DNA Ligase I
    PRK01109
    Location:6577
    PRK01109; ATP-dependent DNA ligase; Provisional
    pfam04675
    Location:4181
    DNA_ligase_A_N; DNA ligase N terminus