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    VAB2 Vab2p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 856713, updated on 8-Jan-2012
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    Summary

    Gene symbol
    VAB2
    Gene description
    Vab2p
    Primary source
    SGD:S000000731
    Locus tag
    YEL005C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    VAB31
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    Genomic context

    Sequence :
    Chromosome: V; NC_001137.3 (145907..146755, complement)
    See VAB2 in MapViewer

    Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Yea6p Neighboring gene Yea4p Neighboring gene Gim4p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Global functional map of the p23 molecular chaperone reveals an extensive cellular network. Echtenkamp FJ, et al. Mol Cell, 2011 Jul 22. PMID 21777812.
    2. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948.
    3. Vac8p, an armadillo repeat protein, coordinates vacuole inheritance with multiple vacuolar processes. Tang F, et al. Traffic, 2006 Oct. PMID 16824055.
    4. Global landscape of protein complexes in the yeast Saccharomyces cerevisiae. Krogan NJ, et al. Nature, 2006 Mar 30. PMID 16554755.
    5. Exploration of the function and organization of the yeast early secretory pathway through an epistatic miniarray profile. Schuldiner M, et al. Cell, 2005 Nov 4. PMID 16269340.

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:36726 BioGRID:31665 BLS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36726 BioGRID:32413 CNL1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36726 BioGRID:33171 KXD1    BioGRID  PubMed Affinity Capture-MS; Two-hybrid 
    BioGRID:36726 BioGRID:33129 NAB2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:36726 BioGRID:33087 PMR1    BioGRID  PubMed Negative Genetic 
    BioGRID:36726 BioGRID:34018 SBA1    BioGRID  PubMed Synthetic Lethality 
    BioGRID:36726 BioGRID:35737 SNN1    BioGRID  PubMed Affinity Capture-MS; Two-hybrid 
    BioGRID:36726 BioGRID:32349 SUR2    BioGRID  PubMed Positive Genetic 
    BioGRID:36726 BioGRID:36717 VAC8    BioGRID  PubMed Affinity Capture-Western; Two-hybrid 
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    General gene information

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
    		  
    transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    cytoplasmic membrane-bounded vesicle IEA
    Inferred from Electronic Annotation
    more info
    		  
    cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		  
    vacuole IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Names
    Vab2p
    NP_010911.1
    • Protein with a potential role in vacuolar function, as suggested by its ability to bind Vac8p; likely member of BLOC complex involved in endosomal cargo sorting; Vab2p-GFP-fusion localizes to cytoplasm in punctate patter
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001137.3

      Range
      145907..146755, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001178820.1 → NP_010911.1  Vab2p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P40003
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006939.2 DAA07646.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P40003.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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