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    VMA22 Vma22p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 856457, updated on 22-Jan-2012
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    Summary

    Gene symbol
    VMA22
    Gene description
    Vma22p
    Primary source
    SGD:S000001102
    Locus tag
    YHR060W
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    CEV1; VPH6
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    Genomic context

    Sequence :
    Chromosome: VIII; NC_001140.6 (220725..221270)
    See VMA22 in MapViewer

    Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Med6p Neighboring gene Fyv4p Neighboring gene Gic1p Neighboring gene Rpp1p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A mitochondrial-focused genetic interaction map reveals a scaffold-like complex required for inner membrane organization in mitochondria. Hoppins S, et al. J Cell Biol, 2011 Oct 17. PMID 21987634.
    2. Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins. Scherrer T, et al. Genome Biol, 2011. PMID 21232131.
    3. The genetic landscape of a cell. Costanzo M, et al. Science, 2010 Jan 22. PMID 20093466.
    4. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948.
    5. High-quality binary protein interaction map of the yeast interactome network. Yu H, et al. Science, 2008 Oct 3. PMID 18719252.

    See all (21) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:36492 BioGRID:32503 ADA2    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:32864 ARL1    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:33675 ARP4    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:35876 BRE5    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:36540 CDC12    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36492 BioGRID:33135 CDC20    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:33931 CNB1    BioGRID  PubMed Synthetic Lethality 
    BioGRID:36492 BioGRID:36271 COG4    BioGRID  PubMed Two-hybrid 
    BioGRID:36492 BioGRID:35783 COG6    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:31360 CSF1    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:31753 DEP1    BioGRID  PubMed Synthetic Lethality 
    BioGRID:36492 BioGRID:35161 ERG6    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:31785 ERV46    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:34635 ESA1    BioGRID  PubMed Synthetic Growth Defect; Synthetic Lethality 
    BioGRID:36492 BioGRID:33226 GET1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:36828 GET2    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:35049 GIM5    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:32205 GIR2    BioGRID  PubMed PCA 
    BioGRID:36492 BioGRID:35584 GIS2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:36492 BioGRID:34469 GYP1    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:35923 HSP82    BioGRID  PubMed Synthetic Lethality 
    BioGRID:36492 BioGRID:34392 HTZ1    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:34321 IRA2    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:36125 LGE1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:34035 MTC2    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:33129 NAB2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:36492 BioGRID:33829 OPI3    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:31831 PRR2    BioGRID  PubMed Biochemical Activity 
    BioGRID:36492 BioGRID:33189 RAD6    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:31315 RIC1    BioGRID  PubMed Synthetic Lethality 
    BioGRID:36492 BioGRID:32522 SDC1    BioGRID  PubMed Two-hybrid 
    BioGRID:36492 BioGRID:33873 STE24    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:33246 SWC4    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:32182 SWF1    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:33324 TOM20    BioGRID  PubMed PCA 
    BioGRID:36492 BioGRID:35141 TSA1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:31705 VMA6    BioGRID  PubMed Two-hybrid 
    BioGRID:36492 BioGRID:33262 VMA7    BioGRID  PubMed Two-hybrid 
    BioGRID:36492 BioGRID:34659 VPH1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:36492 BioGRID:34016 VPH2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:36492 BioGRID:31214 VPS13    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:36061 VPS30    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:31621 VPS38    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:34246 VPS68    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:36158 VTC3    BioGRID  PubMed Two-hybrid 
    BioGRID:36492 BioGRID:36525 YNG2    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36492 BioGRID:36320 YPR153W    BioGRID  PubMed Negative Genetic 
    BioGRID:36492 BioGRID:31529 YPT6    BioGRID  PubMed Synthetic Lethality 
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    General gene information

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    unfolded protein binding IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    unfolded protein binding IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    unfolded protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    vacuolar acidification IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    vacuolar proton-transporting V-type ATPase complex assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    extrinsic to endoplasmic reticulum membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    extrinsic to endoplasmic reticulum membrane IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    extrinsic to endoplasmic reticulum membrane IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
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    General protein information

    Names
    Vma22p
    NP_011927.1
    • Peripheral membrane protein that is required for vacuolar H+-ATPase (V-ATPase) function, although not an actual component of the V-ATPase complex; functions in the assembly of the V-ATPase; localized to the yeast endoplasmic reticulum (ER)
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001140.6

      Range
      220725..221270
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179190.1 → NP_011927.1  Vma22p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P38784
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006934.2 DAA06753.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P38784.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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