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EAF3 Eaf3p [ Saccharomyces cerevisiae S288c ]

Gene ID: 856134, updated on 7-Feb-2016
Gene symbol
EAF3
Gene description
Eaf3p
Primary source
SGD:S000006227
Locus tag
YPR023C
Gene type
protein coding
RNA name
Eaf3p
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See EAF3 in MapViewer
Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (608826..610031, complement)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene amino acid transporter AGC1 Neighboring gene hypothetical protein Neighboring gene i-AAA protease YME1 Neighboring gene TFIIH complex kinase subunit CCL1

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
DNA repair IDA
Inferred from Direct Assay
more info
PubMed 
DNA repair IEA
Inferred from Electronic Annotation
more info
 
cellular response to DNA damage stimulus IEA
Inferred from Electronic Annotation
more info
 
chromatin modification IEA
Inferred from Electronic Annotation
more info
 
chromatin remodeling IBA
Inferred from Biological aspect of Ancestor
more info
 
chromatin silencing IBA
Inferred from Biological aspect of Ancestor
more info
 
histone H2A acetylation IBA
Inferred from Biological aspect of Ancestor
more info
 
histone H4 acetylation IBA
Inferred from Biological aspect of Ancestor
more info
 
histone acetylation IC
Inferred by Curator
more info
PubMed 
histone deacetylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of antisense RNA transcription IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of transcription, DNA-templated IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of DNA-dependent DNA replication initiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription from RNA polymerase II promoter IMP
Inferred from Mutant Phenotype
more info
PubMed 
regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
transcription elongation from RNA polymerase II promoter IGI
Inferred from Genetic Interaction
more info
PubMed 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
NuA4 histone acetyltransferase complex IDA
Inferred from Direct Assay
more info
PubMed 
Rpd3S complex IDA
Inferred from Direct Assay
more info
PubMed 
histone acetyltransferase complex IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
Eaf3p
NP_015348.1
  • Component of the Rpd3S histone deacetylase complex; Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex, homologous to Drosophila dosage compensation protein MSL3; plays a role in regulating Ty1 transposition

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    608826..610031 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184120.1NP_015348.1  Eaf3p [Saccharomyces cerevisiae S288c]

    See identical proteins and their annotated locations for NP_015348.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q12432
    Conserved Domains (2) summary
    cd00024
    Location:68103
    CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    pfam05712
    Location:191378
    MRG; MRG