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HHO1 histone H1 [ Saccharomyces cerevisiae S288c ]

Gene ID: 855976, updated on 5-Jun-2016
Gene symbol
HHO1
Gene description
histone H1
Primary source
SGD:S000006048
Locus tag
YPL127C
Gene type
protein coding
RNA name
histone H1
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See HHO1 in Map Viewer
Location:
chromosome: XVI
Exon count:
1
Sequence:
Chromosome: XVI; NC_001148.4 (308828..309604, complement)

Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene TATA-binding protein-associated factor TAF14 Neighboring gene Tbf1p Neighboring gene Nan1p Neighboring gene Kap120p

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
DNA binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
chromosome condensation IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of DNA recombination IGI
Inferred from Genetic Interaction
more info
PubMed 
negative regulation of DNA recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
negative regulation of chromatin silencing IGI
Inferred from Genetic Interaction
more info
PubMed 
nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription, DNA-templated IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
chromosome IEA
Inferred from Electronic Annotation
more info
 
nuclear chromatin IDA
Inferred from Direct Assay
more info
PubMed 
nuclear nucleosome IPI
Inferred from Physical Interaction
more info
PubMed 
nucleosome IEA
Inferred from Electronic Annotation
more info
 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
histone H1
NP_015198.1
  • Histone H1, linker histone with roles in meiosis and sporulation; decreasing levels early in sporulation may promote meiosis, and increasing levels during sporulation facilitate compaction of spore chromatin; binds to promoters and within genes in mature spores; may be recruited by Ume6p to promoter regions, contributing to transcriptional repression outside of meiosis; suppresses DNA repair involving homologous recombination

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001148.4 Reference assembly

    Range
    308828..309604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183941.1NP_015198.1  histone H1 [Saccharomyces cerevisiae S288c]

    See identical proteins and their annotated locations for NP_015198.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P53551
    Conserved Domains (2) summary
    cd00073
    Location:42127
    H15; linker histone 1 and histone 5 domains; the basic subunit of chromatin is the nucleosome, consisting of an octamer of core histones, two full turns of DNA, a linker histone (H1 or H5) and a variable length of linker DNA; H1/H5 are chromatin-associated ...
    pfam00538
    Location:176251
    Linker_histone; linker histone H1 and H5 family