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    UME1 Ume1p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 855964, updated on 6-Feb-2012
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    Summary

    Gene symbol
    UME1
    Gene description
    Ume1p
    Primary source
    SGD:S000006060
    Locus tag
    YPL139C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Also known as
    WTM3
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    Genomic context

    Sequence :
    Chromosome: XVI; NC_001148.4 (289669..291051, complement)
    See UME1 in MapViewer

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene Frk1p Neighboring gene Mkk2p Neighboring gene Spp1p Neighboring gene Gip3p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A chemical-genetic screen to unravel the genetic network of CDC28/CDK1 links ubiquitin and Rad6-Bre1 to cell cycle progression. Zimmermann C, et al. Proc Natl Acad Sci U S A, 2011 Nov 15. PMID 22042866.
    2. Clathrin light chain directs endocytosis by influencing the binding of the yeast Hip1R homologue, Sla2, to F-actin. Boettner DR, et al. Mol Biol Cell, 2011 Oct. PMID 21849475.
    3. Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes. Lee KK, et al. Mol Syst Biol, 2011 Jul 5. PMID 21734642.
    4. Xbp1-mediated histone H4 deacetylation contributes to DNA double-strand break repair in yeast. Tao R, et al. Cell Res, 2011 Nov. PMID 21467995.
    5. Defining potentially conserved RNA regulons of homologous zinc-finger RNA-binding proteins. Scherrer T, et al. Genome Biol, 2011. PMID 21232131.

    See all (38) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:36043 BioGRID:31301 AAT2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32931 ABD1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:31107 ACT1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35258 ADH3    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:34930 ARC15    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31630 ARC18    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35861 ARC35    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31358 ARP6    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34535 ARP8    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33937 ASH1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:33662 BCK1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36749 BIM1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:33440 BUB1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:31123 BUD27    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33817 CBF1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:35210 CCS1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32859 CDC28    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36043 BioGRID:31579 CDC3    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:31676 CDC73    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35376 CIK1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31402 CKI1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35540 CLA4    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33419 CLC1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:31166 CMK1    BioGRID  PubMed Biochemical Activity 
    BioGRID:36043 BioGRID:36549 COX23    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35835 CSE2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31360 CSF1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36001 CTI6    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:36043 BioGRID:33997 CTK1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35092 CTK3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33330 CTT1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35525 DAL82    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31753 DEP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:33952 DOA1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36200 EAF3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:35305 ECM16    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:32446 EFT2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33978 ELF1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:33453 ELP2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34635 ESA1    BioGRID  PubMed Biochemical Activity 
    BioGRID:36043 BioGRID:33062 GCN1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:31159 GCN20    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:33503 GCN5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:36828 GET2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:30944 GID7    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:35676 GIM3    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:35049 GIM5    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:35584 GIS2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:36043 BioGRID:31115 HAC1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:32677 HAP3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35805 HDA1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31708 HMG2    BioGRID  PubMed PCA 
    BioGRID:36043 BioGRID:32277 HTA1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32276 HTB1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34392 HTZ1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31133 IES1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31327 IES3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36837 IES5    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31643 IKI3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33119 ITC1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34101 IXR1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33726 KAR2    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:34518 LEO1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36125 LGE1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31742 LTE1    BioGRID  PubMed Synthetic Growth Defect 
    BioGRID:36043 BioGRID:33900 MGM101    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34735 MNE1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36099 MOT1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:32950 MTC4    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34213 NUP133    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35040 NUP188    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32369 OMS1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32036 OSH2    BioGRID  PubMed PCA 
    BioGRID:36043 BioGRID:35726 PHO23    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:36043 BioGRID:36147 PHO85    BioGRID  PubMed Biochemical Activity 
    BioGRID:36043 BioGRID:32329 PMP3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35000 PRI1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:33922 PTK1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31190 QCR6    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33593 QCR8    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33189 RAD6    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35250 RCO1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:31315 RIC1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:31012 RIM1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36395 RIM101    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32053 RMD1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36153 RMI1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36679 RML2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35413 RNA1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35511 RPD3    BioGRID  PubMed Affinity Capture-MS; Affinity Capture-Western 
    BioGRID:36043 BioGRID:34872 RPI1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32035 RPN4    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:36359 RPO26    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:34512 RPO31    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33301 RSC1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31307 RSC58    BioGRID  PubMed PCA 
    BioGRID:36043 BioGRID:33870 RSM7    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36869 RSP5    BioGRID  PubMed Protein-peptide 
    BioGRID:36043 BioGRID:32996 RTF1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32600 RTG3    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:30988 RVS161    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32801 RXT2    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:36043 BioGRID:31985 RXT3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:32210 SAC3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35441 SAP30    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:32235 SAS4    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32522 SDC1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34908 SDS3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:31536 SEC22    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31638 SEC61    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34162 SET3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36018 SET6    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33181 SGF73    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:32807 SIF2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34400 SIN3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:35603 SIN4    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:35394 SKY1    BioGRID  PubMed Biochemical Activity 
    BioGRID:36043 BioGRID:32024 SLM3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32561 SMT3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:32983 SNF5    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33860 SOD1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:32454 SPT3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35644 SRP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:35801 SSN8    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33885 STR2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36149 SUV3    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32926 SWC5    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32391 SWR1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35090 TAF8    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33434 TIM13    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34685 TIM18    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:33075 TOS3    BioGRID  PubMed Biochemical Activity 
    BioGRID:36043 BioGRID:31160 UBP6    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36043 UME1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:32257 UME6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:36043 BioGRID:35609 URE2    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31633 VID22    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:34487 VPS21    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:35128 VPS71    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:32537 VPS72    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31788 VPS8    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31601 VRP1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:36729 WBP1    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:34891 XBP1    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:36043 BioGRID:32565 YDR514C    BioGRID  PubMed Negative Genetic 
    BioGRID:36043 BioGRID:31562 YHC1    BioGRID  PubMed Positive Genetic 
    BioGRID:36043 BioGRID:31529 YPT6    BioGRID  PubMed Positive Genetic 
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    General gene information

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    transcription corepressor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    chromatin modification IEA
    Inferred from Electronic Annotation
    more info
    		  
    meiosis IEA
    Inferred from Electronic Annotation
    more info
    		  
    negative regulation of chromatin silencing at telomere IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    negative regulation of transcription from RNA polymerase I promoter IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    positive regulation of transcription from RNA polymerase II promoter IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    positive regulation of transcription from RNA polymerase II promoter in response to heat stress IMP
    Inferred from Mutant Phenotype
    more info
    		  
    regulation of meiosis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    regulation of transcription, DNA-dependent IEA
    Inferred from Electronic Annotation
    more info
    		  
    transcription, DNA-dependent IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    Rpd3L complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Rpd3L-Expanded complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Rpd3S complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Names
    Ume1p
    NP_015186.1
    • Negative regulator of meiosis, required for repression of a subset of meiotic genes during vegetative growth, binding of histone deacetylase Rpd3p required for activity, contains a NEE box and a WD repeat motif; homologous with Wtm1p, Wtm2p
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4

      Range
      289669..291051, complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001183953.1 → NP_015186.1  Ume1p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q03010
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006949.2 DAA11295.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q03010.1 GenPept
    Help top of page

    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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