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PHO23 Pho23p [ Saccharomyces cerevisiae S288c ]

Gene ID: 855626, updated on 26-Aug-2014
Gene symbol
PHO23
Gene description
Pho23p
Primary source
SGD:S000005041
Locus tag
YNL097C
Gene type
protein coding
RNA name
Pho23p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See PHO23 in MapViewer
Location:
chromosome: XIV
Exon count:
1
Sequence:
Chromosome: XIV; NC_001146.8 (441366..442358, complement)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene Ras family GTPase RAS2 Neighboring gene hypothetical protein Neighboring gene tRNA Neighboring gene ribosomal 40S subunit protein S7B

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
methylated histone binding IDA
Inferred from Direct Assay
more info
PubMed 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
Rpd3L complex IDA
Inferred from Direct Assay
more info
PubMed 
Rpd3L-Expanded complex IDA
Inferred from Direct Assay
more info
PubMed 
histone deacetylase complex IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
Pho23p
NP_014302.3
  • Component of the Rpd3L histone deacetylase complex; involved in transcriptional regulation of PHO5; affects termination of snoRNAs and cryptic unstable transcripts (CUTs); C-terminus has similarity to human candidate tumor suppressor p33(ING1) and its isoform ING3

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 

    Range
    441366..442358
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182935.3NP_014302.3  Pho23p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_014302.3

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P50947
    Conserved Domains (3) summary
    COG5034
    Location:5330
    Blast Score: 840
    TNG2; Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics]
    pfam00628
    Location:282329
    Blast Score: 129
    PHD; PHD-finger
    pfam12998
    Location:9111
    Blast Score: 282
    ING; Inhibitor of growth proteins N-terminal histone-binding