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    SEN15 Sen15p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 855081, updated on 8-Jan-2012
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    Summary

    Gene symbol
    SEN15
    Gene description
    Sen15p
    Primary source
    SGD:S000004663
    Locus tag
    YMR059W
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: XIII; NC_001145.3 (391099..391485)
    See SEN15 in MapViewer

    Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Aac1p Neighboring gene Fet3p Neighboring gene Sam37p Neighboring gene Rna14p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. Purification of nuclear poly(A)-binding protein Nab2 reveals association with the yeast transcriptome and a messenger ribonucleoprotein core structure. Batisse J, et al. J Biol Chem, 2009 Dec 11. PMID 19840948.
    2. A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing. Wilmes GM, et al. Mol Cell, 2008 Dec 5. PMID 19061648.
    3. High-quality binary protein interaction map of the yeast interactome network. Yu H, et al. Science, 2008 Oct 3. PMID 18719252.
    4. A proteomics approach to understanding protein ubiquitination. Peng J, et al. Nat Biotechnol, 2003 Aug. PMID 12872131.
    5. Systematic identification of protein complexes in Saccharomyces cerevisiae by mass spectrometry. Ho Y, et al. Nature, 2002 Jan 10. PMID 11805837.

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    NP_013775.1 NP_009405.1 SEN34    BIND  PubMed Sen34p interacts with Sen15p. 
    BioGRID:35234 BioGRID:31301 AAT2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:32683 ACH1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31569 ACO1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:32141 AFR1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31382 AHP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33145 ARC1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31853 ARF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31682 ATG17    BioGRID  PubMed Two-hybrid 
    BioGRID:35234 BioGRID:32740 ATP3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:36231 BRR1    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:31696 CAR2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34278 CDC33    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:35182 CLU1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31265 COF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:32652 COR1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:32207 CPR1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33752 CYR1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33403 CYS4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:36142 EGD1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:35079 ERG13    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:35161 ERG6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:35691 FPR1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31124 FRS2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:36616 GND1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33508 GND2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:30948 GRX1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:32995 GUS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31462 HCR1    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:35812 HEF3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:32710 HHF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33230 KAP122    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:35833 LRO1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:36173 LSP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:36836 MET6    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34123 MRT4    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:33423 MSM1    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:33129 NAB2    BioGRID  PubMed Affinity Capture-RNA 
    BioGRID:35234 BioGRID:36740 NTF2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:32624 NUP170    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:32728 OLA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:36612 OYE2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33492 PFK1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33328 PIL1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34953 PRM2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31315 RIC1    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:33733 RNR2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34404 RRP6    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:35444 RSN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:36779 SAH1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33676 SCP160    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31102 SEC53    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31378 SEN2    BioGRID  PubMed Affinity Capture-Western 
    BioGRID:35234 BioGRID:31794 SEN34    BioGRID  PubMed Two-hybrid 
    BioGRID:35234 BioGRID:32074 SES1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31408 SLS1    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:36703 SNU13    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33860 SOD1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34223 SRP40    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:34051 TEF4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34914 THS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:33619 TIF2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34077 TMA19    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:32508 TSA2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34582 TUF1    BioGRID  PubMed Negative Genetic 
    BioGRID:35234 BioGRID:33955 UBA1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:31215 UBI4    BioGRID  PubMed Affinity Capture-MS; Negative Genetic 
    BioGRID:35234 BioGRID:34716 VMA4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34052 VMA5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34623 WTM1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:35234 BioGRID:34067 YNK1    BioGRID  PubMed Affinity Capture-MS 
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    General gene information

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    contributes_to tRNA-intron endonuclease activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		  
    tRNA-type intron splice site recognition and cleavage IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		  
    membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    mitochondrial outer membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		  
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
    tRNA-intron endonuclease complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
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    General protein information

    Names
    Sen15p
    NP_013775.2
    • Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001145.3

      Range
      391099..391485
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001182557.1 → NP_013775.2  Sen15p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q04675
      Conserved Domains (1) summary
      cl09847
      Location:9 – 127
      Blast Score: 299
      Sen15; Sen15 protein
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006946.2 DAA09957.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    Q04675.2 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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