These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in this
section to the one reported in Genomic regions, transcripts, and products above.
mRNA and Protein(s)
-
NM_003668.2 → NP_003659.2 MAP kinase-activated protein kinase 5 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) is the more frequently occurring transcript.
- Source sequence(s)
-
AF032437, AL110301, AW780199
- Consensus CDS
-
CCDS44976.1
- UniProtKB/Swiss-Prot
-
Q8IW41
- Related
- ENSP00000409640, ENST00000428907
- Conserved Domains (2) summary
-
- smart00220
Location:26 – 304
Blast Score: 653
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cl09925
Location:28 – 303
Blast Score: 472
- PKc_like; Protein Kinases, catalytic domain
-
NM_139078.1 → NP_620777.1 MAP kinase-activated protein kinase 5 isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an extra 6 nt segment in the coding region when compared to variant 1. It encodes an isoform (2) longer by 2 aa, as compared to isoform 1.
- Source sequence(s)
-
AL110301, AW780199, BC000833
- Consensus CDS
-
CCDS44975.1
- UniProtKB/Swiss-Prot
-
Q8IW41
- Related
- ENSP00000202788, ENST00000202788
- Conserved Domains (2) summary
-
- smart00220
Location:26 – 304
Blast Score: 654
- S_TKc; Serine/Threonine protein kinases, catalytic domain
- cl09925
Location:28 – 303
Blast Score: 472
- PKc_like; Protein Kinases, catalytic domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as RefSeqs
for chromosomes and scaffolds (contigs) from both reference and alternate assemblies.
Model RNAs and proteins are also reported here.
Reference GRCh37.p5 Primary Assembly
Genomic
-
NC_000012.11 Reference GRCh37.p5 Primary Assembly
- Range
- 112280279..112331228
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate HuRef
Genomic
-
AC_000144.1 Alternate HuRef
- Range
- 109293619..109344645
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)