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CTK3 Ctk3p [ Saccharomyces cerevisiae S288c ]

Gene ID: 854928, updated on 6-Jul-2014
Gene symbol
CTK3
Gene description
Ctk3p
Primary source
SGD:S000004580
Locus tag
YML112W
Gene type
protein coding
RNA name
Ctk3p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See CTK3 in MapViewer
Location:
chromosome: XIII
Exon count :
1
Sequence:
Chromosome: XIII; NC_001145.3 (45063..45953)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Taf8p Neighboring gene Dat1p Neighboring gene ubiquitin-ubiquitin ligase BUL2 Neighboring gene 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
cellular response to DNA damage stimulus IEA
Inferred from Electronic Annotation
more info
 
mRNA 3'-end processing IC
Inferred by Curator
more info
PubMed 
mRNA processing IEA
Inferred from Electronic Annotation
more info
 
positive regulation of DNA-templated transcription, elongation IDA
Inferred from Direct Assay
more info
PubMed 
positive regulation of transcription from RNA polymerase I promoter IMP
Inferred from Mutant Phenotype
more info
PubMed 
positive regulation of translational fidelity IPI
Inferred from Physical Interaction
more info
PubMed 
protein phosphorylation IPI
Inferred from Physical Interaction
more info
PubMed 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus IEA
Inferred from Electronic Annotation
more info
 
nucleoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
trimeric positive transcription elongation factor complex b IDA
Inferred from Direct Assay
more info
PubMed 
Names
Ctk3p
NP_013595.1
  • Gamma subunit of C-terminal domain kinase I; CTDK-I phosphorylates RNA polymerase II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and also phosphorylates ribosomal protein Rps2p to increase translational fidelity; protein abundance increases in response to DNA replication stress

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 

    Range
    45063..45953
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182474.1NP_013595.1  Ctk3p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_013595.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P46963
    Conserved Domains (1) summary
    pfam12350
    Location:221292
    Blast Score: 214
    CTK3_C; CTD kinase subunit gamma CTK3 C-terminus

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