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WAR1 War1p [ Saccharomyces cerevisiae S288c ]

Gene ID: 854899, updated on 7-Sep-2014
Gene symbol
WAR1
Gene description
War1p
Primary source
SGD:S000004541
Locus tag
YML076C
Gene type
protein coding
RNA name
War1p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See WAR1 in MapViewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (112513..115347, complement)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene peptidylprolyl isomerase CPR3 Neighboring gene Bet5p Neighboring gene hydroxymethylglutaryl-CoA reductase (NADPH) HMG1 Neighboring gene peptidylprolyl isomerase FPR3

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
sequence-specific DNA binding RNA polymerase II transcription factor activity IEA
Inferred from Electronic Annotation
more info
 
sequence-specific DNA binding transcription factor activity IC
Inferred by Curator
more info
PubMed 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
War1p
NP_013635.1
  • Homodimeric Zn2Cys6 zinc finger transcription factor; binds to a weak acid response element to induce transcription of PDR12 and FUN34, encoding an acid transporter and a putative ammonia transporter, respectively

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 

    Range
    112513..115347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182435.1NP_013635.1  War1p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_013635.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q03631
    Conserved Domains (1) summary
    cd00067
    Location:71112
    Blast Score: 111
    GAL4; GAL4-like Zn2Cys6 binuclear cluster DNA-binding domain; found in transcription regulators like GAL4. Domain consists of two helices organized around a Zn(2)Cys(6 )motif; Binds to sequences containing 2 DNA half sites comprised of 3-5 C/G combinations