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    FAF1 Faf1p [ Saccharomyces cerevisiae S288c ]

    Gene ID: 854793, updated on 8-Jan-2012
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    Summary

    Gene symbol
    FAF1
    Gene description
    Faf1p
    Primary source
    SGD:S000001281
    Locus tag
    YIL019W
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Saccharomyces cerevisiae S288c (strain: S288c)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
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    Genomic context

    Sequence :
    Chromosome: IX; NC_001141.2 (315093..316133)
    See FAF1 in MapViewer

    Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene Rpb3p Neighboring gene His6p Neighboring gene Rpl2bp Neighboring gene Vid28p

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    Genomic regions, transcripts, and products

    Go to nucleotideGraphics FASTA GenBank

    Go to reference sequence details
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    Bibliography

    Related articles in PubMed

    1. A mitochondrial-focused genetic interaction map reveals a scaffold-like complex required for inner membrane organization in mitochondria. Hoppins S, et al. J Cell Biol, 2011 Oct 17. PMID 21987634.
    2. Composition of yeast snRNPs and snoRNPs in the absence of trimethylguanosine caps reveals nuclear cap binding protein as a gained U1 component implicated in the cold-sensitivity of tgs1Δ cells. Schwer B, et al. Nucleic Acids Res, 2011 Aug. PMID 21558325.
    3. A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing. Wilmes GM, et al. Mol Cell, 2008 Dec 5. PMID 19061648.
    4. Yeast Rrp14p is a nucleolar protein involved in both ribosome biogenesis and cell polarity. Yamada H, et al. RNA, 2007 Nov. PMID 17804645.
    5. Fcf1p and Fcf2p are novel nucleolar Saccharomyces cerevisiae proteins involved in pre-rRNA processing. Rempola B, et al. Biochem Biophys Res Commun, 2006 Jul 28. PMID 16762320.

    See all (10) citations in PubMed

    See citations in PubMed for homologs of this gene provided by HomoloGene

    GeneRIFs: Gene References Into Functions What's a GeneRIF?

    Submit: New GeneRIF Correction
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    Interactions

    Products Interactant Other Gene Complex Source Pubs Description
    BioGRID:34969 BioGRID:32351 BFR2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:35968 BMS1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:34477 BUD21    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31398 DIP2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33837 EAF6    BioGRID  PubMed Positive Genetic 
    BioGRID:34969 BioGRID:35305 ECM16    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31456 EMG1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:32942 ENP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:32396 FCF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31326 FCF2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:35204 HOF1    BioGRID  PubMed Positive Genetic 
    BioGRID:34969 BioGRID:36582 IMP3    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:35748 IMP4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33845 JSN1    BioGRID  PubMed Positive Genetic 
    BioGRID:34969 BioGRID:35695 KRE33    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:30927 KRR1    BioGRID  PubMed Affinity Capture-MS; Two-hybrid 
    BioGRID:34969 BioGRID:36871 LCP5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33758 MPP10    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33423 MSM1    BioGRID  PubMed Positive Genetic 
    BioGRID:34969 BioGRID:36055 NAN1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:36313 NOC4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:32040 NOP1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31913 NOP14    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:34698 NOP58    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:34542 PNO1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31035 PWP2    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:34394 RCL1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:32119 RPS13    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31700 RPS1A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33879 RPS5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:34494 RPS7A    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:34050 RRP14    BioGRID  PubMed Two-hybrid 
    BioGRID:34969 BioGRID:36303 RRP9    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31910 SAS10    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31240 SOF1    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33647 UTP10    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:34034 UTP11    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31489 UTP13    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:35268 UTP15    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33686 UTP18    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:32698 UTP20    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:31666 UTP21    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33333 UTP22    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:34191 UTP30    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:32382 UTP4    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:32459 UTP5    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:36827 UTP7    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:33376 UTP8    BioGRID  PubMed Affinity Capture-MS 
    BioGRID:34969 BioGRID:36630 UTP9    BioGRID  PubMed Affinity Capture-MS 
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    General gene information

    Homology

    Gene Ontology Provided by GO

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleolus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		  
    nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  
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    General protein information

    Names
    Faf1p
    NP_012245.1
    • Protein required for pre-rRNA processing and 40S ribosomal subunit assembly
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    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001141.2

      Range
      315093..316133
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001179369.1 → NP_012245.1  Faf1p [Saccharomyces cerevisiae S288c]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P40546
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    Related Sequences

    Nucleotide Protein
    Heading Accession and Version
    genomic BK006942.2 DAA08526.1
    Protein Accession Links
    GenePept Link UniProtKB Link
    P40546.1 GenPept
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    Additional Links

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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