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RPB3 DNA-directed RNA polymerase II core subunit RPB3 [ Saccharomyces cerevisiae S288c ]

Gene ID: 854791, updated on 16-Jul-2015
Gene symbol
RPB3
Gene description
DNA-directed RNA polymerase II core subunit RPB3
Primary source
SGD:S000001283
Locus tag
YIL021W
Gene type
protein coding
RNA name
DNA-directed RNA polymerase II core subunit RPB3
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See RPB3 in MapViewer
Location:
chromosome: IX
Exon count:
1
Sequence:
Chromosome: IX; NC_001141.2 (312905..313861)

Chromosome IX - NC_001141.2Genomic Context describing neighboring genes Neighboring gene Zn(2+) transporter YKE4 Neighboring gene Tim44p Neighboring gene 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase HIS6 Neighboring gene Faf1p

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
DNA-directed RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to RNA polymerase II activity IDA
Inferred from Direct Assay
more info
PubMed 
contributes_to RNA-directed RNA polymerase activity IDA
Inferred from Direct Assay
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
termination of RNA polymerase II transcription IMP
Inferred from Mutant Phenotype
more info
PubMed 
transcription from RNA polymerase II promoter IMP
Inferred from Mutant Phenotype
more info
PubMed 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
DNA-directed RNA polymerase II, core complex IDA
Inferred from Direct Assay
more info
PubMed 
nucleoplasm IDA
Inferred from Direct Assay
more info
PubMed 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
DNA-directed RNA polymerase II core subunit RPB3
NP_012243.3
  • RNA polymerase II third largest subunit B44; part of central core; similar to prokaryotic alpha subunit

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001141.2 Reference assembly

    Range
    312905..313861
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179371.3NP_012243.3  DNA-directed RNA polymerase II core subunit RPB3 [Saccharomyces cerevisiae S288c]

    See identical proteins and their annotated locations for NP_012243.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P16370
    Conserved Domains (2) summary
    cd07031
    Location:6265
    RNAP_II_RPB3; RPB3 subunit of Eukaryotic RNA polymerase II
    smart00662
    Location:18258
    RPOLD; RNA polymerases D