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ZNF518B zinc finger protein 518B [ Homo sapiens (human) ]

Gene ID: 85460, updated on 26-May-2016
Official Symbol
ZNF518Bprovided by HGNC
Official Full Name
zinc finger protein 518Bprovided by HGNC
Primary source
HGNC:HGNC:29365
See related
Ensembl:ENSG00000178163 HPRD:13889; Vega:OTTHUMG00000160060
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Orthologs
Location:
4p16.1
Exon count:
3
Annotation release Status Assembly Chr Location
107 current GRCh38.p2 (GCF_000001405.28) 4 NC_000004.12 (10439873..10457408, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (10441497..10459032, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene MX dynamin like GTPase 1 pseudogene Neighboring gene dynein light chain Tctex-type 1 pseudogene Neighboring gene uncharacterized LOC105374482 Neighboring gene reactive intermediate imine deaminase A homolog pseudogene Neighboring gene cytokine dependent hematopoietic cell linker Neighboring gene uncharacterized LOC105374481

Products Interactant Other Gene Complex Source Pubs Description

Markers

Homology

Clone Names

  • KIAA1729

Gene Ontology Provided by GOA

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
regulation of transcription from RNA polymerase II promoter IEA
Inferred from Electronic Annotation
more info
 
transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053042.2NP_444270.2  zinc finger protein 518B

    See identical proteins and their annotated locations for NP_444270.2

    Status: VALIDATED

    Source sequence(s)
    AC110768, AL833306, BC040874, CD656908
    Consensus CDS
    CCDS33960.1
    UniProtKB/Swiss-Prot
    Q9C0D4
    Related
    ENSP00000317614, OTTHUMP00000217412, ENST00000326756, OTTHUMT00000359040
    Conserved Domains (2) summary
    pfam13465
    Location:176197
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:137157
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 107 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p2 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p2 Primary Assembly

    Range
    10439873..10457408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005248193.1XP_005248250.1  

    See identical proteins and their annotated locations for XP_005248250.1

    UniProtKB/Swiss-Prot
    Q9C0D4
    Conserved Domains (2) summary
    pfam13465
    Location:176197
    zf-H2C2_2; Zinc-finger double domain
    sd00017
    Location:137157
    ZF_C2H2; C2H2 Zn finger [structural motif]

Alternate CHM1_1.1

Genomic

  1. NC_018915.2 Alternate CHM1_1.1

    Range
    10439467..10456990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)