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RPA190 Rpa190p [ Saccharomyces cerevisiae S288c ]

Gene ID: 854519, updated on 22-Jul-2014
Gene symbol
RPA190
Gene description
Rpa190p
Primary source
SGD:S000005868
Locus tag
YOR341W
Gene type
protein coding
RNA name
Rpa190p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
RRN1
See RPA190 in MapViewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (960987..965981)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene putative E2 ubiquitin-protein ligase UBC11 Neighboring gene Rpa43p Neighboring gene hypothetical protein Neighboring gene gag protein Neighboring gene gag-pol fusion protein

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by GO

Function Evidence Code Pubs
DNA binding IEA
Inferred from Electronic Annotation
more info
 
DNA-directed RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 
contributes_to RNA polymerase I activity IDA
Inferred from Direct Assay
more info
PubMed 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
nucleotidyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
DNA-directed RNA polymerase I complex IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
nucleolus IEA
Inferred from Electronic Annotation
more info
 
nucleus IEA
Inferred from Electronic Annotation
more info
 
Names
Rpa190p
NP_014986.3
  • RNA polymerase I largest subunit A190

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 

    Range
    960987..965981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183761.3NP_014986.3  Rpa190p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_014986.3

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P10964
    Conserved Domains (4) summary
    cd02735
    Location:11731657
    Blast Score: 1165
    RNAP_I_Rpa1_C; Largest subunit (Rpa1) of Eukaryotic RNA polymerase I (RNAP I), C-terminal domain
    pfam04998
    Location:9891613
    Blast Score: 1112
    RNA_pol_Rpb1_5; RNA polymerase Rpb1, domain 5
    COG0086
    Location:91074
    Blast Score: 1622
    RpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription]
    cd01435
    Location:161035
    Blast Score: 3157
    RNAP_I_RPA1_N; Largest subunit (RPA1) of eukaryotic RNA polymerase I (RNAP I), N-terminal domain