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ABP140 Abp140p [ Saccharomyces cerevisiae S288c ]

Gene ID: 854414, updated on 6-Jul-2014
Gene symbol
ABP140
Gene description
Abp140p
Primary source
SGD:S000005765
Locus tag
YOR239W
Gene type
protein coding
RNA name
Abp140p
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
TRM140; YOR240W
See ABP140 in MapViewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (784857..786744)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene Hes1p Neighboring gene hypothetical protein Neighboring gene tetrahydrofolate synthase Neighboring gene Ssp2p

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by GO

Function Evidence Code Pubs
actin binding IEA
Inferred from Electronic Annotation
more info
 
actin filament binding IDA
Inferred from Direct Assay
more info
PubMed 
methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
protein binding, bridging IDA
Inferred from Direct Assay
more info
PubMed 
tRNA (cytosine-3-)-methyltransferase activity IDA
Inferred from Direct Assay
more info
 
tRNA (cytosine-3-)-methyltransferase activity IMP
Inferred from Mutant Phenotype
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
actin filament bundle assembly IDA
Inferred from Direct Assay
more info
PubMed 
methylation IEA
Inferred from Electronic Annotation
more info
 
tRNA methylation IMP
Inferred from Mutant Phenotype
more info
 
Component Evidence Code Pubs
actin cortical patch IDA
Inferred from Direct Assay
more info
PubMed 
actin filament IDA
Inferred from Direct Assay
more info
PubMed 
actin filament bundle IDA
Inferred from Direct Assay
more info
PubMed 
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
mating projection tip IDA
Inferred from Direct Assay
more info
PubMed 
Names
Abp140p
NP_014882.4
  • AdoMet-dependent tRNA methyltransferase and actin binding protein; C-terminal domain is responsible for 3-methylcytidine modification of residue 32 of the tRNA anticodon loop of tRNA-Thr and tRNA-Ser and contains an S-adenosylmethionine (AdoMet) binding motif; N-terminal actin binding sequence interacts with actin filaments and localizes to actin patches and cables; N- and C-terminal domains are encoded in separate ORFs that are translated into one protein via a +1 frameshift

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 

    Range
    784857..786744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183658.4NP_014882.4  Abp140p [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_014882.4

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q08641
    Conserved Domains (2) summary
    cd02440
    Location:436545
    Blast Score: 127
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    COG0500
    Location:385624
    Blast Score: 144
    SmtA; SAM-dependent methyltransferases [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]