RPL33B Rpl33bp [Saccharomyces cerevisiae S288c] - Gene

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Summary

Gene symbol: RPL33B
Gene description: Rpl33bp
Primary source: SGD:S000005760
Locus tag: YOR234C
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Saccharomyces cerevisiae S288c (strain: S288c)
Lineage: Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as: RPL37B

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Genomic context

Location :: chromosome: XV

Sequence :: Chromosome: XV; NC_001147.6 (778555..779405, complement)

See RPL33B in MapViewer

Chromosome XV - NC_001147.6 Genomic Context describing neighboring genes

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Genomic regions, transcripts, and products

Genomic Sequence

Go to nucleotideGraphics FASTA GenBank

Go to reference sequence details

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Bibliography

GeneRIFs: Gene References Into Functions What's a GeneRIF?

Submit: New GeneRIF Correction

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Interactions

Products	Interactant	Other Gene	Source	Pubs	Description
BioGRID:34627	BioGRID:36771	ARB1	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:31825	CDC13	BioGRID	PubMed	Synthetic Rescue
BioGRID:34627	BioGRID:35584	GIS2	BioGRID	PubMed	Affinity Capture-MS; Affinity Capture-RNA
BioGRID:34627	BioGRID:36877	GLC7	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:35364	HSC82	BioGRID	PubMed	Synthetic Growth Defect
BioGRID:34627	BioGRID:35923	HSP82	BioGRID	PubMed	Synthetic Growth Defect
BioGRID:34627	BioGRID:32115	MAK21	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:33129	NAB2	BioGRID	PubMed	Affinity Capture-RNA
BioGRID:34627	BioGRID:33346	NOP7	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:35101	ORC1	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:31349	RPL10	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:33327	RPL11B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:31979	RPL13A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:33584	RPL17B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:35421	RPL20A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:33279	RPL26B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:31986	RPL31A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:36040	RPL33A	BioGRID	PubMed	Synthetic Lethality
BioGRID:34627	BioGRID:35068	RPL6A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:36634	RPN10	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:31152	RPN11	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:32443	RPP2B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:31014	RPS14A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:32502	RPS17B	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:36817	RPS24A	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:32472	RRP17	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:31850	SEC31	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:32566	SLF1	BioGRID	PubMed	Affinity Capture-RNA
BioGRID:34627	BioGRID:31147	SPB4	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:30946	SRO9	BioGRID	PubMed	Affinity Capture-RNA
BioGRID:34627	BioGRID:31215	UBI4	BioGRID	PubMed	Affinity Capture-MS
BioGRID:34627	BioGRID:36901	UBP3	BioGRID	PubMed	Affinity Capture-MS

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General gene information

Homology

Homologs of the RPL33B gene: The RPL33B gene is conserved in mouse, rat, C.elegans, S.cerevisiae, K.lactis, , S.pombe, , N.crassa, A.thaliana, rice, and P.falciparum.

Pathways from BioSystems

Cap-dependent Translation Initiation, organism-specific biosystem (from REACTOME)
Cap-dependent Translation Initiation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Eukaryotic Translation Elongation, organism-specific biosystem (from REACTOME)
Eukaryotic Translation Elongation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Eukaryotic Translation Initiation, organism-specific biosystem (from REACTOME)
Eukaryotic Translation Initiation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Formation of a pool of free 40S subunits, organism-specific biosystem (from REACTOME)
Formation of a pool of free 40S subunits, organism-specific biosystemcomputationally inferred pathway (not manually curated)
GTP hydrolysis and joining of the 60S ribosomal subunit, organism-specific biosystem (from REACTOME)
GTP hydrolysis and joining of the 60S ribosomal subunit, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Gene Expression, organism-specific biosystem (from REACTOME)
Gene Expression, organism-specific biosystemcomputationally inferred pathway (not manually curated)
L13a-mediated translational silencing of Ceruloplasmin expression, organism-specific biosystem (from REACTOME)
L13a-mediated translational silencing of Ceruloplasmin expression, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Metabolism of proteins, organism-specific biosystem (from REACTOME)
Metabolism of proteins, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Peptide chain elongation, organism-specific biosystem (from REACTOME)
Peptide chain elongation, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Ribosome, organism-specific biosystem (from KEGG)
Ribosome, organism-specific biosystem
Ribosome
Ribosome, conserved biosystem (from KEGG)
Ribosome, conserved biosystem
Ribosome
Ribosome, eukaryotes, organism-specific biosystem (from KEGG)
Ribosome, eukaryotes, organism-specific biosystemStructural complex; Genetic information processing; Ribosome
SRP-dependent cotranslational protein targeting to membrane, organism-specific biosystem (from REACTOME)
SRP-dependent cotranslational protein targeting to membrane, organism-specific biosystemcomputationally inferred pathway (not manually curated)
Translation, organism-specific biosystem (from REACTOME)
Translation, organism-specific biosystemcomputationally inferred pathway (not manually curated)

Gene Ontology Provided by GO

Function	Evidence Code	Pubs
structural constituent of ribosome	IDA Inferred from Direct Assay more info	PubMed
structural constituent of ribosome	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
cytoplasmic translation	IDA Inferred from Direct Assay more info	PubMed
translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
cytoplasm	IEA Inferred from Electronic Annotation more info
cytosolic large ribosomal subunit	IDA Inferred from Direct Assay more info	PubMed
intracellular	IEA Inferred from Electronic Annotation more info
ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
ribosome	IEA Inferred from Electronic Annotation more info

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General protein information

Names: Rpl33bp

NP_014877.1

Ribosomal protein L37 of the large (60S) ribosomal subunit, nearly identical to Rpl33Ap and has similarity to rat L35a; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable

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NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

NC_001147.6

Range

778555..779405, complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_001183653.1 → NP_014877.1 Rpl33bp [Saccharomyces cerevisiae S288c]

Status: PROVISIONAL

UniProtKB/Swiss-Prot

P41056

Conserved Domains (1) summary

cl01033
Location:7 – 101
Blast Score: 402

Ribosomal_L35Ae; Ribosomal protein L35Ae