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YOR192C-A gag protein [ Saccharomyces cerevisiae S288c ]

Gene ID: 854366, updated on 22-Aug-2014
Gene symbol
YOR192C-A
Gene description
gag protein
Primary source
SGD:S000007353
Locus tag
YOR192C-A
Gene type
protein coding
RNA name
gag protein
RefSeq status
PROVISIONAL
Organism
Saccharomyces cerevisiae S288c (strain: S288c)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
See YOR192C-A in MapViewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (708416..709732, complement)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene Thi72p Neighboring gene hypothetical protein Neighboring gene gag-pol fusion protein Neighboring gene tRNA Neighboring gene Pex27p

Products Interactant Other Gene Complex Source Pubs Description

Gene Ontology Provided by GO

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
RNA binding ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Process Evidence Code Pubs
transposition, RNA-mediated ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
cytoplasm IEA
Inferred from Electronic Annotation
more info
 
retrotransposon nucleocapsid ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Names
gag protein
NP_058186.1
  • Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 

    Range
    708416..709732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184387.1NP_058186.1  gag protein [Saccharomyces cerevisiae S288c]

    See proteins identical to NP_058186.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q12439
    Conserved Domains (1) summary
    pfam01021
    Location:17114
    Blast Score: 438
    TYA; TYA transposon protein